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C1CBN5 (C1CBN5_STRZJ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.23 EMBL ACO19693.1
Gene names
Ordered Locus Names:SPJ_0090
OrganismStreptococcus pneumoniae (strain JJA) [Complete proteome] [HAMAP]
Taxonomic identifier488222 [NCBI]
Taxonomic lineageBacteriaFirmicutesLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length595 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C1CBN5 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 485534FAD96D22EC

FASTA59569,011
        10         20         30         40         50         60 
MTRFEIRDDF YLDGKSFKIL SGAIHYFRIP PEDWYHSLYN LKALGFNTVE TYVAWNLHEP 

        70         80         90        100        110        120 
REGEFHFEGD LDLEKFLQIA QDLGLYAIVR PSPFICAEWE FGGLPAWLLT KNMRIRSSDP 

       130        140        150        160        170        180 
AYIEAVGRYY DQLLPRLVPR LLDNGGNILM MQVENEYGSY GEDKAYLRAI RQLMEECGVT 

       190        200        210        220        230        240 
CPLFTSDGPW RATLKAGTLI EEDLFVTGNF GSKAPYNFSQ MQEFFDEHGK KWPLMCMEFW 

       250        260        270        280        290        300 
DGWFNRWKEP IITRDPKELA DAVREVLEQG SINLYMFHGG TNFGFMNGCS ARGTLDLPQV 

       310        320        330        340        350        360 
TSYDYDALLD EEGNPTAKYL AVKKMMATHF SEYPQLEPLY KESMELDAIP LVEKVSLFET 

       370        380        390        400        410        420 
LDSLSSPVES LYPQKMEELG QSYGYLLYRT ETNWDAEEER LRIIDGRDRA QLYVDGQWVK 

       430        440        450        460        470        480 
TQYQTEIGED IFYQGKKKGL SRLDILIENM GRVNYGHKFL ADTQRKGIRT GVCKDLHFLL 

       490        500        510        520        530        540 
NWKHYPLPLD NPEKIDFSKG WTQGQPAFYA YDFTVEEPKD TYLDLSEFGK GVAFVNGQNL 

       550        560        570        580        590 
GRFWNVGPTL SLYIPHSYLK EGANRIIIFE TEGQYKEEIH LTRKPTLKHI KGENL 

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References

[1]"Complete genome sequence of Streptococcus pneumoniae strain JJA."
Hotopp J.D., Censini S., Masignani V., Covacci A., Tettelin H.
Submitted (DEC-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000919 Genomic DNA. Translation: ACO19693.1.
RefSeqYP_002735206.1. NC_012466.1.

3D structure databases

ProteinModelPortalC1CBN5.
ModBaseSearch...

Protein-protein interaction databases

STRINGC1CBN5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBSTRT00000076279; EBSTRP00000071878; EBSTRG00000077057.
GeneID7678636.
GenomeReviewsGene locus SPJ_0090 in contig CP000919_GR.
KEGGsjj:SPJ_0090.
PATRIC19695204. VBIStrPne71544_0082.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000028870.
OMAENMGRVS.
ProtClustDBCLSK881272.

Enzyme and pathway databases

BioCycSPNE1313:SPJ_0090-MONOMER.

Family and domain databases

InterProIPR008979. Galactose-bd-like.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PANTHERPTHR23421. Glyco_hydro_35. 1 hit.
PfamPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1CBN5_STRZJ
AccessionPrimary (citable) accession number: C1CBN5
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)