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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

sun

Organism
Streptococcus pneumoniae (strain 70585)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciSPNE488221:GH4U-1733-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Name:sunImported
Ordered Locus Names:SP70585_1774Imported
OrganismiStreptococcus pneumoniae (strain 70585)Imported
Taxonomic identifieri488221 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000002211 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliC1C8X1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini158 – 435278SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiLRVNRQH.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1C8X1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKVETARSL ALAVLEDVFV NQAYSNIALN KHLKGSQLSA ADKGLVTELV
60 70 80 90 100
YGTVARKLTL EWYLSHFIED RDQLDSWLYV LLLMSAYQLR YLDKIPDHAV
110 120 130 140 150
VNEAVELAKL RKKGSEKLVN AVLRRILREG WPDIASIKRK NKRDSIAYSL
160 170 180 190 200
PVWLVAKLKE EYGEERAKAI FESLLVRNKA SIRVTDLSRK EEIQALLEAN
210 220 230 240 250
NSLLATTGLV KEQGHFAGHN LFADGAITIQ DESSQLVAPT LDLQGDERVL
260 270 280 290 300
DACAAPGGKT AHIASYLTTG QVTALDLYDH KLDLIQENAQ RLGIEDRVQT
310 320 330 340 350
QKLDARKVHE FFDQDSFDKI LVDAPCSGIG LLRRKPDIKY NKETADFASL
360 370 380 390 400
QEIQLEILGS VCQILGKGGI ITYSTCTIVS EENFQVVKAF LESHPEFEQV
410 420 430
KLEHECKDIM KDGCILITPE LYGSDGFFIS QFRKISD
Length:437
Mass (Da):49,013
Last modified:May 26, 2009 - v1
Checksum:iCC0E9DCCA63B10CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000918 Genomic DNA. Translation: ACO17283.1.
RefSeqiWP_015898747.1. NC_012468.1.

Genome annotation databases

EnsemblBacteriaiACO17283; ACO17283; SP70585_1774.
KEGGisnm:SP70585_1774.
PATRICi19669951. VBIStrPne83895_1838.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000918 Genomic DNA. Translation: ACO17283.1.
RefSeqiWP_015898747.1. NC_012468.1.

3D structure databases

ProteinModelPortaliC1C8X1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACO17283; ACO17283; SP70585_1774.
KEGGisnm:SP70585_1774.
PATRICi19669951. VBIStrPne83895_1838.

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiLRVNRQH.

Enzyme and pathway databases

BioCyciSPNE488221:GH4U-1733-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC1C8X1_STRP7
AccessioniPrimary (citable) accession number: C1C8X1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: September 7, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.