C1BAK3 (C1BAK3_RHOOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase EMBL BAH52706.1
EC=2.6.1.19 EMBL BAH52706.1

Gene names

Name:	gabT EMBL BAH52706.1
Ordered Locus Names:	ROP_44590 EMBL BAH52706.1

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP] EMBL BAH52706.1

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus › Rhodococcus opacus

Protein attributes

Sequence length	413 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL BAH52706.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1BAK3 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 5ED5508189CA2422	FASTA	413	43,644
	10 20 30 40 50 60 MTRLSPLLAQ ATPVTVDHGE GCYLYGTDGR RYLDFTAGIG VTSTGHCHPH VVEAARRQVG 70 80 90 100 110 120 SLIHGQYTTV MHQPMLELVD RLGSVLPPGL DSLFFANSGS EAVEASLRLS RQATGRPNII 130 140 150 160 170 180 VFHGGFHGRT VATATMTTSG TRFSAGFSPL MGGVHVAPFP NAYRYGWSEE EATAFALKEL 190 200 210 220 230 240 DYIFATLTAP NETAAFVVEP VLGEGGYVPG NTAFFQGLRE RADKYGILLV IDEIQTGFGR 250 260 270 280 290 300 TGKFFGHQHF DVRPDIITIA KGLASGFPLS GIAASEELMA KGWPGSQGGT YGGNAVSCAA 310 320 330 340 350 360 AVATLEVIEK EDLVANAAAR GIQLLEGARQ KAIEGIGDVR GLGLLVGSEF TAADGSADRA 370 380 390 400 410 KAAAAQQLAA KKGLLLLTCG AHMNVVRMIP PLIVTSEQIE DALKIWSEVL DEV

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B4 EMBL BAH52706.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH52706.1.
RefSeq	YP_002781651.1. NC_012522.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	632772.ROP_44590.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAH52706; BAH52706; ROP_44590.
GeneID	7744340.
KEGG	rop:ROP_44590.
PATRIC	23226249. VBIRhoOpa21106_4502.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K00823.
OMA	FPTAFRY.
ProtClustDB	CLSK643595.
Enzyme and pathway databases
BioCyc	ROPA632772:GH0Q-6463-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1BAK3_RHOOB

Accession

Primary (citable) accession number: C1BAK3

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)