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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

gabT

Organism
Rhodococcus opacus (strain B4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciROPA632772:GH0Q-4497-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:ROP_44590Imported
OrganismiRhodococcus opacus (strain B4)Imported
Taxonomic identifieri632772 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
ProteomesiUP000002212 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi632772.ROP_44590.

Structurei

3D structure databases

ProteinModelPortaliC1BAK3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiIHMSGTD.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1BAK3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRLSPLLAQ ATPVTVDHGE GCYLYGTDGR RYLDFTAGIG VTSTGHCHPH
60 70 80 90 100
VVEAARRQVG SLIHGQYTTV MHQPMLELVD RLGSVLPPGL DSLFFANSGS
110 120 130 140 150
EAVEASLRLS RQATGRPNII VFHGGFHGRT VATATMTTSG TRFSAGFSPL
160 170 180 190 200
MGGVHVAPFP NAYRYGWSEE EATAFALKEL DYIFATLTAP NETAAFVVEP
210 220 230 240 250
VLGEGGYVPG NTAFFQGLRE RADKYGILLV IDEIQTGFGR TGKFFGHQHF
260 270 280 290 300
DVRPDIITIA KGLASGFPLS GIAASEELMA KGWPGSQGGT YGGNAVSCAA
310 320 330 340 350
AVATLEVIEK EDLVANAAAR GIQLLEGARQ KAIEGIGDVR GLGLLVGSEF
360 370 380 390 400
TAADGSADRA KAAAAQQLAA KKGLLLLTCG AHMNVVRMIP PLIVTSEQIE
410
DALKIWSEVL DEV
Length:413
Mass (Da):43,644
Last modified:May 26, 2009 - v1
Checksum:i5ED5508189CA2422
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011115 Genomic DNA. Translation: BAH52706.1.
RefSeqiWP_012691630.1. NC_012522.1.

Genome annotation databases

EnsemblBacteriaiBAH52706; BAH52706; ROP_44590.
KEGGirop:ROP_44590.
PATRICi23226249. VBIRhoOpa21106_4502.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011115 Genomic DNA. Translation: BAH52706.1.
RefSeqiWP_012691630.1. NC_012522.1.

3D structure databases

ProteinModelPortaliC1BAK3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi632772.ROP_44590.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAH52706; BAH52706; ROP_44590.
KEGGirop:ROP_44590.
PATRICi23226249. VBIRhoOpa21106_4502.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiIHMSGTD.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciROPA632772:GH0Q-4497-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
    Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
    Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: B4Imported.

Entry informationi

Entry nameiC1BAK3_RHOOB
AccessioniPrimary (citable) accession number: C1BAK3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: July 22, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.