C1B997 (PATR_RHOOB) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Putative phenylalanine aminotransferase
EC=2.6.1.-

Gene names

Name:	pat
Ordered Locus Names:	ROP_40030

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP]

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	May catalyze the transamination reaction in phenylalanine biosynthesis By similarity. HAMAP MF_01513
Cofactor	Pyridoxal phosphate By similarity. HAMAP MF_01513
Sequence similarities	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.

Ontologies

Keywords
Ligand	Pyridoxal phosphate
Molecular function	Aminotransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	histidine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	histidinol-phosphate transaminase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 358	358	Putative phenylalanine aminotransferase HAMAP MF_01513		PRO_1000185065
Amino acid modifications
	Modified residue	214	1	N6-(pyridoxal phosphate)lysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	C1B997 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 7AD4019A5ABE3505	FASTA	358	37,535
	10 20 30 40 50 60 MTPRTRTDLD TITAYVPGKS YPGAIKLASN ETTLGPLPSV RDAIADAAAN ANRYPDNGHV 70 80 90 100 110 120 ALIAAIADHF GVATANVAVG AGSVSLCQEL VHATCNDGDE VMFAWRSFEA YPVVTRVAGA 130 140 150 160 170 180 VPVTVPLTAD YRHDLDAMAA AVTDRTRLIF VCTPNNPTGP ALSTSELERF LDAVPDRVVV 190 200 210 220 230 240 ALDEAYFEYN RSGTDGLDLF RRYPNVVVLR TFSKAYGLAG LRVGYAIADA AIVAALSKVH 250 260 270 280 290 300 IAFTVNAVAQ AAAIASLAAS GELLARTDGV VAERNRVRDA LLAAGYEVPE SDANFVYLPL 310 320 330 340 350 GSRSGAFGAA SAEAGVLLRP YGDDGVRITI GDPEENDAFL AFATSTEARS IANVAVRA

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B4.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH52250.1.
RefSeq	YP_002781195.1. NC_012522.1.
3D structure databases
ProteinModelPortal	C1B997.
ModBase	Search...
Protein-protein interaction databases
STRING	C1B997.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7747586.
GenomeReviews	Gene locus ROP_40030 in contig AP011115_GR.
KEGG	rop:ROP_40030.
PATRIC	23225305. VBIRhoOpa21106_4038.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	NNTKIVW.
ProtClustDB	PRK03321.
Family and domain databases
HAMAP	MF_01513. Phe_aminotrans_2. [Tree]
InterPro	IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR024892. AroT. IPR005861. HisP_aminotrans. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00817.
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01141. HisC. 1 hit.
PROSITE	PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

PATR_RHOOB

Accession

Primary (citable) accession number: C1B997

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 28, 2009
Last sequence update:	May 26, 2009
Last modified:	January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program