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Protein
Submitted name:

Putative rRNA methyltransferase

Gene

ROP_69450

Organism
Rhodococcus opacus (strain B4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciROPA632772:GH0Q-7001-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative rRNA methyltransferaseImported (EC:2.1.1.-Imported)
Gene namesi
Ordered Locus Names:ROP_69450Imported
OrganismiRhodococcus opacus (strain B4)Imported
Taxonomic identifieri632772 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000002212 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi632772.ROP_69450.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini193 – 475283SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C1B4K3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSESRRPARR GQSGSGARNN RPRQARRPDA SQSGLDQPRL AARDVLRAVR
60 70 80 90 100
ERDAYANLVL PGLLRERRLD GRDAALATEL AYGAARARGL LDAVIADCAG
110 120 130 140 150
RPIDEIDGPL LDVLQLGAYQ LLRTRVAPHA AVATSVDLVR AEAGPGKAGF
160 170 180 190 200
VNAVLRRVSE RSEAEWVERL APADPVGRLA FEHAHPTWIA QVFADALGAD
210 220 230 240 250
AGELEDVLIA DDARPAVHLV ARPGEISSEE LALATGGEVG RYSPYAVYLD
260 270 280 290 300
GGDPGLLDAV REGLAGVQDE GSQLVARALS LAPLDGPDAG RWLDLCAGPG
310 320 330 340 350
GKAALLGALA GIEGGRLDAV EPVAHRADLI RKTTKELPVD VHVADGRDPG
360 370 380 390 400
LEGGFDRILV DAPCTGLGAL RRRPEARWRR QPSDVAGLAK LQRELLASAA
410 420 430 440 450
GLVRPGGVIL YATCSPHLSE TVAVVADAVR RHGLTALDTR ELVPGVPGLG
460 470
DGPSVQLWPH RHGTDAMFMA ALRKP
Length:475
Mass (Da):50,136
Last modified:May 26, 2009 - v1
Checksum:i993991E1C7BD664D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011115 Genomic DNA. Translation: BAH55192.1.
RefSeqiWP_015890618.1. NC_012522.1.

Genome annotation databases

EnsemblBacteriaiBAH55192; BAH55192; ROP_69450.
KEGGirop:ROP_69450.
PATRICi23231343. VBIRhoOpa21106_7030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP011115 Genomic DNA. Translation: BAH55192.1.
RefSeqiWP_015890618.1. NC_012522.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi632772.ROP_69450.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAH55192; BAH55192; ROP_69450.
KEGGirop:ROP_69450.
PATRICi23231343. VBIRhoOpa21106_7030.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiLRVNRQH.
OrthoDBiPOG091H02E2.

Enzyme and pathway databases

BioCyciROPA632772:GH0Q-7001-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC1B4K3_RHOOB
AccessioniPrimary (citable) accession number: C1B4K3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: September 7, 2016
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.