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C1B356 (C1B356_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Dihydrodipicolinate reductase HAMAP MF_00102
Short name=DHPR HAMAP MF_00102
EC=1.3.1.26 HAMAP MF_00102
Gene names
Name:dapB HAMAP MF_00102 EMBL BAH54973.1
Ordered Locus Names:ROP_67260
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP]
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length252 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

(S)-2,3,4,5-tetrahydrodipicolinate + NAD(P)+ = (S)-2,3-dihydrodipicolinate + NAD(P)H. HAMAP MF_00102 SAAS SAAS022664

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 4/4. HAMAP MF_00102 SAAS SAAS022664

Subcellular location

Cytoplasm By similarity HAMAP MF_00102 SAAS SAAS022664.

Sequence similarities

Belongs to the dihydrodipicolinate reductase family. HAMAP MF_00102

Sequences

Sequence LengthMass (Da)Tools
C1B356 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: C2B9D4491BCD0677

FASTA25226,537
        10         20         30         40         50         60 
MSAAAPIRVG VLGAKGKVGR AICEAVEQAP DLELVAEVDH GDRLESFVEA GTQVVVDFTH 

        70         80         90        100        110        120 
PDVVMDNLKF LVSNGIHAVV GTTGFDDTRL DAVRSWVTER PEVGVLIAPN FAIGAVLSMR 

       130        140        150        160        170        180 
FAEAAARFFD SVEVIELHHP NKADAPSGTA YRTAALISEA RRKAGVGPSP DATTTELDGA 

       190        200        210        220        230        240 
RGADVDGVRV HSVRLAGLVA HQEVILGTQG ETLTIRHDSI DRNSFAPGVL LGVREIGSRP 

       250 
GLTVGIDPLL DL

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP011115 Genomic DNA. Translation: BAH54973.1.
RefSeqYP_002783918.1. NC_012522.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC1B356.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7745398.
GenomeReviewsGene locus ROP_67260 in contig AP011115_GR.
KEGGrop:ROP_67260.
PATRIC23230885. VBIRhoOpa21106_6807.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMADRASFMP.
ProtClustDBPRK00048.

Family and domain databases

HAMAPMF_00102. DapB.
[Tree]
InterProIPR022663. DapB_C.
IPR000846. DapB_N.
IPR022664. DapB_N_CS.
IPR011770. Dihydrodipicolinate_Rdtase.
IPR023940. Dihydrodipicolinate_Rdtase_bac.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00215.
PANTHERPTHR20836. DapB_bac/pln. 1 hit.
PfamPF05173. DapB_C. 1 hit.
PF01113. DapB_N. 1 hit.
[Graphical view]
PIRSFPIRSF000161. DHPR. 1 hit.
TIGRFAMsTIGR00036. DapB. 1 hit.
PROSITEPS01298. DAPB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1B356_RHOOB
AccessionPrimary (citable) accession number: C1B356
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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