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C1B162 (C1B162_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Adenosine deaminase HAMAP MF_00540
EC=3.5.4.4 HAMAP MF_00540
Alternative name(s):
Adenosine aminohydrolase HAMAP MF_00540
Gene names
Name:add HAMAP MF_00540 EMBL BAH54557.1
Ordered Locus Names:ROP_63100
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP]
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length361 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Adenosine + H2O = inosine + NH3. HAMAP MF_00540

Cofactor

Binds 1 zinc ion per subunit By similarity. HAMAP MF_00540 SAAS SAAS006330

Sequence similarities

Belongs to the adenosine and AMP deaminases family. Adenosine deaminase subfamily. HAMAP MF_00540

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2101Proton donor By similarity HAMAP MF_00540
Metal binding181Zinc; catalytic By similarity HAMAP MF_00540
Metal binding201Zinc; catalytic By similarity HAMAP MF_00540
Metal binding2071Zinc; catalytic By similarity HAMAP MF_00540
Metal binding2991Zinc; catalytic By similarity HAMAP MF_00540
Binding site201Substrate By similarity HAMAP MF_00540
Binding site221Substrate By similarity HAMAP MF_00540
Binding site1801Substrate; via amide nitrogen and carbonyl oxygen By similarity HAMAP MF_00540
Site2311Important for catalytic activity By similarity HAMAP MF_00540

Sequences

Sequence LengthMass (Da)Tools
C1B162 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: EC290B9A5524106A

FASTA36139,594
        10         20         30         40         50         60 
MTALDLSALR RAPKVLLHDH LDGGLRPETV LELARDCGYD ALPADTAPAL ATWFREAADS 

        70         80         90        100        110        120 
GSLERYLETF AHTVAVMQTP VGLERVAREC AEDLADDGVV YAEVRFAPEQ HLEEGLTLDE 

       130        140        150        160        170        180 
VVEQVLLGFE AGESAAEVRG QNIRIGVLLT AMRHAARSRE IAELAVRFRD RGVVGFDIAG 

       190        200        210        220        230        240 
AEAGNPPSRH LDAFEYMRGS NAHFTIHAGE AFGLPSIHEA IAFCGTDRLG HGVRITDDIT 

       250        260        270        280        290        300 
IGADGVPVLG KLANYVRDKR IPLELCPSSN VQTGAVDALE NHPFDLLARL RFRVTVNTDN 

       310        320        330        340        350        360 
RLMSDTSMSQ EMLRLVETFG YGWTDLERYT INAMKSAFIP FDQRLQLIDE VIKPGFAVLV 


G

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References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP011115 Genomic DNA. Translation: BAH54557.1.
RefSeqYP_002783502.1. NC_012522.1.

3D structure databases

ProteinModelPortalC1B162.
ModBaseSearch...

Protein-protein interaction databases

STRINGC1B162.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7742077.
GenomeReviewsGene locus ROP_63100 in contig AP011115_GR.
KEGGrop:ROP_63100.
PATRIC23230023. VBIRhoOpa21106_6380.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAPYYMAMN.
ProtClustDBPRK09358.

Family and domain databases

HAMAPMF_00540. A_deaminase.
[Tree]
InterProIPR001365. A/AMP_deaminase_dom.
IPR006330. A_deaminase.
[Graphical view]
KOK01488.
PANTHERPTHR11409:SF21. PTHR11409:SF21. 1 hit.
PfamPF00962. A_deaminase. 1 hit.
[Graphical view]
TIGRFAMsTIGR01430. Aden_deam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1B162_RHOOB
AccessionPrimary (citable) accession number: C1B162
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info