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C1B071 (C1B071_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445
Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein HAMAP MF_01445
Gene names
Name:gcp HAMAP MF_01445 EMBL BAH54492.1
Ordered Locus Names:ROP_62450
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP]
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length345 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445

Subcellular location

Cytoplasm By similarity HAMAP MF_01445 SAAS SAAS017860.

Sequence similarities

Belongs to the KAE1 / YgjD family. HAMAP MF_01445

Ontologies

Keywords
   Biological processtRNA processing HAMAP MF_01445 SAAS SAAS017860
   Cellular componentCytoplasm HAMAP MF_01445 SAAS SAAS017860
   Molecular functionHydrolase EMBL BAH54492.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: InterPro

threonylcarbamoyladenosine biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionmetalloendopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C1B071 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 4C9CCDE0033D3E56

FASTA34535,191
        10         20         30         40         50         60 
MIVMGIESSC DETGVGIVRW NGDGTCELLA DEVASSVDQH ARYGGVVPEV ASRAHLEAIV 

        70         80         90        100        110        120 
PTMRRALAAA GIVKPDALAV TIGPGLAGAL LVGVAAAKAY AAAWDVPFYA VNHLGGHVSV 

       130        140        150        160        170        180 
DTLEHGPMPP CVALLVSGGH THLLHVEDLA KPIVELGTTV DDAAGEAFDK VARLLGLGFP 

       190        200        210        220        230        240 
GGPALDAAAQ DGDRNAISFP RGMTGPRDAR HDFSFSGLKT AVARYVESKE RAGEACSVPD 

       250        260        270        280        290        300 
IAASFQEAVA DVLTMKAVRA ARDVGVDTLV LGGGATANSR IRALAEERCA EAGLTLRVPK 

       310        320        330        340 
PRLCTDNGVM IASLGAHLIA GGAAPSLLTV ASDPGLSVAT SQVFS

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP011115 Genomic DNA. Translation: BAH54492.1.
RefSeqYP_002783437.1. NC_012522.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC1B071.

Protein family/group databases

MEROPSM22.A01.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7742677.
GenomeReviewsGene locus ROP_62450 in contig AP011115_GR.
KEGGrop:ROP_62450.
PATRIC23229889. VBIRhoOpa21106_6313.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAPLYGVNH.
ProtClustDBPRK09604.

Family and domain databases

HAMAPMF_01445. gcp.
[Tree]
InterProIPR022450. Pept_M22_O-sialoglycopept.
IPR000905. Peptidase_M22.
IPR017860. Peptidase_M22_CS.
IPR017861. Peptidase_M22_subgr.
[Graphical view]
KOK01409.
PfamPF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSPR00789. OSIALOPTASE.
TIGRFAMsTIGR03723. Bact_gcp. 1 hit.
TIGR00329. Gcp_kae1. 1 hit.
PROSITEPS01016. GLYCOPROTEASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1B071_RHOOB
AccessionPrimary (citable) accession number: C1B071
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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