C1B066 (C1B066_RHOOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL BAH54487.1
EC=5.1.1.1 EMBL BAH54487.1

Gene names

Name:	alr EMBL BAH54487.1
Ordered Locus Names:	ROP_62400 EMBL BAH54487.1

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP] EMBL BAH54487.1

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus › Rhodococcus opacus

Protein attributes

Sequence length	400 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL BAH54487.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1B066 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: F3B90705D1A02D74	FASTA	400	41,837
	10 20 30 40 50 60 MTLAEAVPAD DHGHSEPAAP AQAAAPQAEA VVDLDAIAHN VRILRDSARG AAMMAVVKAD 70 80 90 100 110 120 GYNHGAVAVA RAALAAGASE LGVTTVSEAL TLRRAGIDAP VLAWLHTVDA DFAPAIAADV 130 140 150 160 170 180 ELGVSSPRHL AAVVAAARRV GTPAIVTMKV DTGLNRNGVA PDELAQVLVD LARAQAEGSV 190 200 210 220 230 240 RLRGIFSHLA HADEPHHAWI DSQRDRLVDA IADAKRHGLV PEVVHLSNSA ATLTRPDLRF 250 260 270 280 290 300 DMVRPGIAIY GLSPVPELGQ FGLRPAMTLR SRVALVKKVA AGEGVSYGHQ WVAPRDTTVA 310 320 330 340 350 360 LLPLGYADGL PRSLSGRFEV QLGAERRPGI GRVCMDQVVV DLGPDGGGVR EGDTAVFFGN 370 380 390 400 GDLGEPIAQE WADKLDTIHY EVVTGVRGRT VRTYVGGTGT

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B4 EMBL BAH54487.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH54487.1.
RefSeq	YP_002783432.1. NC_012522.1.
3D structure databases
ProteinModelPortal	C1B066.
ModBase	Search...
Protein-protein interaction databases
STRING	632772.ROP_62400.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAH54487; BAH54487; ROP_62400.
GeneID	7742673.
KEGG	rop:ROP_62400.
PATRIC	23229879. VBIRhoOpa21106_6308.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	NFKSIEI.
ProtClustDB	PRK00053.
Enzyme and pathway databases
BioCyc	ROPA632772:GH0Q-6090-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1B066_RHOOB

Accession

Primary (citable) accession number: C1B066

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)