C1B023 (C1B023_RHOOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L24 HAMAP MF_01326

Gene names

Name:	rplX HAMAP MF_01326 EMBL BAH54444.1
Ordered Locus Names:	ROP_61970

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP]

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	106 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity. HAMAP MF_01326 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP MF_01326
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01326
Sequence similarities	Belongs to the ribosomal protein L24P family. HAMAP MF_01326 RuleBase RU003477

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01326
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01326 RuleBase RU003477 EMBL BAH54444.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1B023 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: E78ABB2CFA2D0D60	FASTA	106	11,264
	10 20 30 40 50 60 MMKVHKGDTV LVIAGKDKGA KGKVIQAYPA TNKVLVEGVN RIKKHTAVSA NERGASSGGI 70 80 90 100 VTQEAPIHVS NVAVVDSDGN PTRVGYRTDE ESGKRVRISR KNGKDI

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH54444.1.
RefSeq	YP_002783389.1. NC_012522.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1B023.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7743720.
GenomeReviews	Gene locus ROP_61970 in contig AP011115_GR.
KEGG	rop:ROP_61970.
PATRIC	23229791. VBIRhoOpa21106_6264.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	KPTRVGY.
ProtClustDB	PRK00004.
Family and domain databases
HAMAP	MF_01326_B. Ribosomal_L24_B. [Tree]
InterPro	IPR005824. KOW. IPR003256. Ribosomal_L24. IPR005825. Ribosomal_L24/26_CS. IPR014723. Ribosomal_L24_SH3-like. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.200. Ribosomal_L24_SH3-like. 1 hit.
KO	K02895.
PANTHER	PTHR12903. Ribosomal_L24. 1 hit.
Pfam	PF00467. KOW. 1 hit. [Graphical view]
SMART	SM00739. KOW. 1 hit. [Graphical view]
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01079. RplX_bact. 1 hit.
PROSITE	PS01108. RIBOSOMAL_L24. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1B023_RHOOB

Accession

Primary (citable) accession number: C1B023

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)