Skip Header

Contribute Send feedback
Read comments (?) or add your own

C1AZS6 (C1AZS6_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=5.4.99.16 EMBL BAH54347.1
Gene names
Name:treS EMBL BAH54347.1
Ordered Locus Names:ROP_61000
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP]
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus

Protein attributes

Sequence length618 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C1AZS6 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 3A7DF755A1CCE27B

FASTA61870,517
        10         20         30         40         50         60 
MPLEDSSSAH ADPSRAGAVP PEHDLEGHLI EARSEDYFHA RELQVDNEWF KTAVFYEVLV 

        70         80         90        100        110        120 
RAFFDSSGDG TGDLRGLTSK LDYLSWLGVD CLWLPPFYDS PLRDGGYDIR DFRAVLPEFG 

       130        140        150        160        170        180 
TVEDFVQLFD QAHRRGIRVI TDLVMNHTSD THAWFQESRN DPDGPYGDFY VWSDRDEGYP 

       190        200        210        220        230        240 
DARVIFVDTE TSNWTWDPVR GQYYWHRFFS HQPDLNYDNP GVQDAMIDVL RFWLDLGIDG 

       250        260        270        280        290        300 
FRLDAVPYLF ERDGTNCENL PETHAFLKRC RAVMDAEYPG RALLAEANQW PSDVVEYFGE 

       310        320        330        340        350        360 
PDVGDECHMA FHFPLMPRIF MAVRRQNRFP ISEILAQTPP IPSSCQWGIF LRNHDELTLE 

       370        380        390        400        410        420 
MVSDEERDYM YSEYAQDPRM KANIGIRRRL APLLENDRNQ LELFTALLLS LPGSPVLYYG 

       430        440        450        460        470        480 
DEIGMGDNIW LGDRDSVRTP MQWTPDRNAG FSRADPARMY LPVIMDPTYG YQSVNVESQM 

       490        500        510        520        530        540 
NSTNSLLHWT RRLIQVRKQH PAFGTASFTE LGSANPAVLS YVRETPPSPD RPYSDVILCV 

       550        560        570        580        590        600 
NNLSRFPQAV ILDLSQFAGR IPVELTGSVP FPTIGDDGYM ITLPGHGFFW FALQPDPQSD 

       610 
GAVSGHPVSS EAEQAVQQ 

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP011115 Genomic DNA. Translation: BAH54347.1.
RefSeqYP_002783292.1. NC_012522.1.

3D structure databases

ProteinModelPortalC1AZS6.
ModBaseSearch...

Protein-protein interaction databases

STRINGC1AZS6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7742590.
GenomeReviewsGene locus ROP_61000 in contig AP011115_GR.
KEGGrop:ROP_61000.
PATRIC23229597. VBIRhoOpa21106_6167.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMARAAMYGW.
ProtClustDBCLSK871760.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 3 hits.
KOK05343.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
TIGRFAMsTIGR02456. TreS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1AZS6_RHOOB
AccessionPrimary (citable) accession number: C1AZS6
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)