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C1AZQ1 (C1AZQ1_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL BAH54322.1
Gene names
Ordered Locus Names:ROP_60750 EMBL BAH54322.1
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP] EMBL BAH54322.1
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus

Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
C1AZQ1 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 3EF0B654A3CCD922

FASTA46150,922
        10         20         30         40         50         60 
MSKHHHHHHR DVISPAYTGR LSIDPFPALR MPDDETDPEA AYRFIHDELM LDGSSRLNLA 

        70         80         90        100        110        120 
TFVTTWMDPE ADRLMAETFD KNMIDKDEYP ATAAIEARCV SMVADLFHAP DLSTTDPASA 

       130        140        150        160        170        180 
TGVSTIGSSE AVMLGGLALK WRWRAKREAA GKDTARPNLV LGSNVQVVWE KFCRYFDVEP 

       190        200        210        220        230        240 
KYLPMEKGRY VITPEQVRDA VDENTIGAVV IVGTTYTGEL EPVAEIAAAL DALAASGGPD 

       250        260        270        280        290        300 
VPIHVDAASG GFVVPFLQPE LLWDFRVPRV ASINVSGHKY GLTYPGIGFV VWRERECLPE 

       310        320        330        340        350        360 
GLVFRVNYLG GDMPTFTLNF SRPGNQVVGQ YYNFLRLGRA GYRSIMETLR DTAVRVGKRI 

       370        380        390        400        410        420 
AELEYFTLIT DGTDIPVLAF ELVGDPGFTV FDVSHEMRAR GWQVPAYTMP ADAEDVAVLR 

       430        440        450        460 
IVVREGFSAD LGTLVAEAIE EVCAELREKG GGHSTEQHFA H 

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References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: B4 EMBL BAH54322.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP011115 Genomic DNA. Translation: BAH54322.1.
RefSeqYP_002783267.1. NC_012522.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING632772.ROP_60750.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH54322; BAH54322; ROP_60750.
GeneID7742568.
KEGGrop:ROP_60750.
PATRIC23229547. VBIRhoOpa21106_6142.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAIADLWNA.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK792489.

Enzyme and pathway databases

BioCycROPA632772:GH0Q-6121-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1AZQ1_RHOOB
AccessionPrimary (citable) accession number: C1AZQ1
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)