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C1AZQ1

- C1AZQ1_RHOOB

UniProt

C1AZQ1 - C1AZQ1_RHOOB

Protein

Glutamate decarboxylase

Gene

ROP_60750

Organism
Rhodococcus opacus (strain B4)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciROPA632772:GH0Q-6121-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:ROP_60750Imported
    OrganismiRhodococcus opacus (strain B4)Imported
    Taxonomic identifieri632772 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
    ProteomesiUP000002212: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi632772.ROP_60750.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiAQYYTFL.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C1AZQ1-1 [UniParc]FASTAAdd to Basket

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    MSKHHHHHHR DVISPAYTGR LSIDPFPALR MPDDETDPEA AYRFIHDELM    50
    LDGSSRLNLA TFVTTWMDPE ADRLMAETFD KNMIDKDEYP ATAAIEARCV 100
    SMVADLFHAP DLSTTDPASA TGVSTIGSSE AVMLGGLALK WRWRAKREAA 150
    GKDTARPNLV LGSNVQVVWE KFCRYFDVEP KYLPMEKGRY VITPEQVRDA 200
    VDENTIGAVV IVGTTYTGEL EPVAEIAAAL DALAASGGPD VPIHVDAASG 250
    GFVVPFLQPE LLWDFRVPRV ASINVSGHKY GLTYPGIGFV VWRERECLPE 300
    GLVFRVNYLG GDMPTFTLNF SRPGNQVVGQ YYNFLRLGRA GYRSIMETLR 350
    DTAVRVGKRI AELEYFTLIT DGTDIPVLAF ELVGDPGFTV FDVSHEMRAR 400
    GWQVPAYTMP ADAEDVAVLR IVVREGFSAD LGTLVAEAIE EVCAELREKG 450
    GGHSTEQHFA H 461
    Length:461
    Mass (Da):50,922
    Last modified:May 26, 2009 - v1
    Checksum:i3EF0B654A3CCD922
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011115 Genomic DNA. Translation: BAH54322.1.
    RefSeqiYP_002783267.1. NC_012522.1.

    Genome annotation databases

    EnsemblBacteriaiBAH54322; BAH54322; ROP_60750.
    GeneIDi7742568.
    KEGGirop:ROP_60750.
    PATRICi23229547. VBIRhoOpa21106_6142.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011115 Genomic DNA. Translation: BAH54322.1 .
    RefSeqi YP_002783267.1. NC_012522.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 632772.ROP_60750.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAH54322 ; BAH54322 ; ROP_60750 .
    GeneIDi 7742568.
    KEGGi rop:ROP_60750.
    PATRICi 23229547. VBIRhoOpa21106_6142.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi AQYYTFL.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci ROPA632772:GH0Q-6121-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
      Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
      Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B4Imported.

    Entry informationi

    Entry nameiC1AZQ1_RHOOB
    AccessioniPrimary (citable) accession number: C1AZQ1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3