C1AWN8 (C1AWN8_RHOOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Beta-galactosidase PIRNR PIRNR001084
Short name=Beta-gal PIRNR PIRNR001084
EC=3.2.1.23 PIRNR PIRNR001084

Gene names

Name:	bga EMBL BAH53811.1
Ordered Locus Names:	ROP_55640

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP]

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	694 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. PIRNR PIRNR001084
Sequence similarities	Belongs to the glycosyl hydrolase 42 family. PIRNR PIRNR001084

Ontologies

Keywords
Ligand	Metal-binding PIRSR PIRSR001084-3 Zinc PIRSR PIRSR001084-3
Molecular function	Glycosidase PIRNR PIRNR001084 EMBL BAH53811.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular function	beta-galactosidase activity Inferred from electronic annotation. Source: EC cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	162	1	Proton donor By similarity PIRSR PIRSR001084-1
	Active site	328	1	Nucleophile By similarity PIRSR PIRSR001084-1
	Metal binding	170	1	Zinc By similarity PIRSR PIRSR001084-3
	Binding site	123	1	Substrate By similarity PIRSR PIRSR001084-2
	Binding site	161	1	Substrate By similarity PIRSR PIRSR001084-2
	Binding site	336	1	Substrate By similarity PIRSR PIRSR001084-2

Sequences

	Sequence		Length	Mass (Da)
	C1AWN8 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 31D5224887799099	FASTA	694	76,320
	10 20 30 40 50 60 MSMHTASDSG GRHLRWPTRG ISFGGDYNPE QWPEEVWQRD VELMREAGVD FATVGVFSWA 70 80 90 100 110 120 RLQPTPSTWD FGWLDRVLDL LDGGGVRVDL ATATASPPPW LTAAHPEIRP VDERGYRYEI 130 140 150 160 170 180 GSRQTWSPSS PIYREHSLVL VEKMATRYGD HPALALWHVS NELGCHNSRC HSPDSARAFR 190 200 210 220 230 240 RWLQRRYGDL TELNRAWGTT FWSQHYGDWD EVVPPSASTT FGNPTHLLDW RRFCSDALLD 250 260 270 280 290 300 QYLAEREVLR RITPDVPVTT NFMVGMGSPQ SLAGDMNYAQ WAPEQDLVST DHYLVGPAAG 310 320 330 340 350 360 DGAAHHRLSF SADLTRGIAD SRPWLLMEHS TSAVNWQPVN RAKAPGEMLR NSLAHVARGA 370 380 390 400 410 420 DGIAFFQFRA SQAGAEKFHS ALVPHAGPDS ARWREVVQLG AVLRRLEPVA GSRVEAPVGV 430 440 450 460 470 480 LFDWESQWAC EQDGHPSRLM QPMTIAEQMH RAFAGVTCDV VPPDADLDRY SVLVVPAMYL 490 500 510 520 530 540 CSDGDAARIE AAARAGAQVL VTAFSGIADR DDHVRLGGYP GAFRDLLGVR VEEFFPLGAD 550 560 570 580 590 600 ETAALDDGTS ARTWTEYLTV SEDVDVLARH AEGHLQGVPA VTRRSVGDGA AWYLATVPDP 610 620 630 640 650 660 RGLERIAESI CSAAGLALHT GQHSDVEIVR RRGEHGSWLF VLNHTNEKVT VDVSGTDLVT 670 680 690 ERVVDGPLTL EPGNCAVIRE DGAGTGAPTR KADA

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH53811.1.
RefSeq	YP_002782756.1. NC_012522.1.
3D structure databases
ProteinModelPortal	C1AWN8.
ModBase	Search...
Protein-protein interaction databases
STRING	C1AWN8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7746177.
GenomeReviews	Gene locus ROP_55640 in contig AP011115_GR.
KEGG	rop:ROP_55640.
PATRIC	23228479. VBIRhoOpa21106_5611.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	PLAWFRA.
Family and domain databases
InterPro	IPR013739. Beta_galactosidase_C. IPR013738. Beta_galactosidase_Trimer. IPR003476. Glyco_hydro_42. IPR013529. Glyco_hydro_42_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K12308.
Pfam	PF02449. Glyco_hydro_42. 1 hit. PF08533. Glyco_hydro_42C. 1 hit. PF08532. Glyco_hydro_42M. 1 hit. [Graphical view]
PIRSF	PIRSF001084. B-galactosidase. 1 hit.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1AWN8_RHOOB

Accession

Primary (citable) accession number: C1AWN8

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)