C1AVT4 (C1AVT4_RHOOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Name:	gdhA EMBL BAH49364.1
Ordered Locus Names:	ROP_11170

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP]

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	447 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004418 PIRNR PIRNR000185 EMBL BAH49364.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	128	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	C1AVT4 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: A1FBB4ECED6C538A	FASTA	447	48,169
	10 20 30 40 50 60 MSTRDRVAEI YEQVRLRNAG EPEFHQAAAE VFESLQVVLE RRPHYADSGL IERLCEPERQ 70 80 90 100 110 120 IIFRVPWVDD SGNVHVNRGF RVQYNSVLGP YKGGLRFHPS VNLGIVKFLG FEQIFKNALT 130 140 150 160 170 180 GLPIGGGKGG SDFDPKGRSE AEIMRFCQSF MTELHRHIGE YTDVPAGDIG VGGREIGYLF 190 200 210 220 230 240 GQYKRLTNSY ESGVLTGKGL TWGGSQVRRE ATGYGVAYFV AEMLKTANSS LGGKTVVVSG 250 260 270 280 290 300 SGNVAIYAIE KVHQLGGIAI AASDSAGYVV DEKGIDLELL KEIKEVRRGR ISEYADTVPH 310 320 330 340 350 360 ARFVPNGSIW DVPCDVALPC ATQNELDESA AKTLVTNGVQ AVAEGANMPT TPQGVQVFRD 370 380 390 400 410 420 AAVAFAPGKA ANAGGVATSA LEMQQNASRD SWGFAYTDER LAGIMRGIHE RTVTTAAEYG 430 440 MPGDYVHGAN IAGFVKVADA MISLGVI

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH49364.1.
RefSeq	YP_002778309.1. NC_012522.1.
3D structure databases
ProteinModelPortal	C1AVT4.
ModBase	Search...
Protein-protein interaction databases
STRING	C1AVT4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7744181.
GenomeReviews	Gene locus ROP_11170 in contig AP011115_GR.
KEGG	rop:ROP_11170.
PATRIC	23219427. VBIRhoOpa21106_1120.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	KGLTYGG.
ProtClustDB	PRK09414.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00262.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
PROSITE	PS00074. GLFV_DEHYDROGENASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1AVT4_RHOOB

Accession

Primary (citable) accession number: C1AVT4

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	January 25, 2012
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)