C1AUS5 (C1AUS5_RHOOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase LigC EMBL BAH53415.1
EC=6.5.1.1 EMBL BAH53415.1

Gene names

Name:	ligC EMBL BAH53415.1
Ordered Locus Names:	ROP_51680 EMBL BAH53415.1

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP] EMBL BAH53415.1

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus › Rhodococcus opacus

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL BAH53415.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1AUS5 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 66A589E3487652BE	FASTA	347	38,304
	10 20 30 40 50 60 MDLPVMPPLQ PMLAKAASSV PAQPESGLAW SYEPKWDGFR VLVFRDGDEV VLGSRGGKDL 70 80 90 100 110 120 ARYFPELVRA VKDELPERCV VDGELVVPRN IDGRTRLDWE SLSERIHPAE SRVTMLAEKT 130 140 150 160 170 180 PAQFVAFDLL ALGDRDLSRE DFSVRRAQLV DTIGGGPSCH VTAATESSAT ATEWFEAFEG 190 200 210 220 230 240 AGLDGVVAKK LVGPYLPNKR EMVKVKHART ADCVVIGYRP HKSQPGIGSM LLGLYDGDQM 250 260 270 280 290 300 AMVGGASAFT AARRIELLAE LDELRVGDDV VADGAPTRWQ SGNDRTWVPL RPERVVEVAY 310 320 330 340 DQMEGARFRH AARFLRWRPD RTPDECTFQQ LEVPVRYDLA DVLAGGS

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B4 EMBL BAH53415.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH53415.1.
RefSeq	YP_002782360.1. NC_012522.1.
3D structure databases
ProteinModelPortal	C1AUS5.
ModBase	Search...
Protein-protein interaction databases
STRING	632772.ROP_51680.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAH53415; BAH53415; ROP_51680.
GeneID	7743262.
KEGG	rop:ROP_51680.
PATRIC	23227709. VBIRhoOpa21106_5227.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222508.
KO	K01971.
OMA	FRHAARF.
ProtClustDB	PRK08224.
Enzyme and pathway databases
BioCyc	ROPA632772:GH0Q-6721-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C1AUS5_RHOOB

Accession

Primary (citable) accession number: C1AUS5

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)