Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C1AUS5

- C1AUS5_RHOOB

UniProt

C1AUS5 - C1AUS5_RHOOB

Protein
Submitted name:

ATP-dependent DNA ligase LigC

Gene

ligC

Organism
Rhodococcus opacus (strain B4)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciROPA632772:GH0Q-5211-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigCImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligCImported
    Ordered Locus Names:ROP_51680Imported
    OrganismiRhodococcus opacus (strain B4)Imported
    Taxonomic identifieri632772 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
    ProteomesiUP000002212: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi632772.ROP_51680.

    Structurei

    3D structure databases

    ProteinModelPortaliC1AUS5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiYRPHKSQ.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C1AUS5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDLPVMPPLQ PMLAKAASSV PAQPESGLAW SYEPKWDGFR VLVFRDGDEV    50
    VLGSRGGKDL ARYFPELVRA VKDELPERCV VDGELVVPRN IDGRTRLDWE 100
    SLSERIHPAE SRVTMLAEKT PAQFVAFDLL ALGDRDLSRE DFSVRRAQLV 150
    DTIGGGPSCH VTAATESSAT ATEWFEAFEG AGLDGVVAKK LVGPYLPNKR 200
    EMVKVKHART ADCVVIGYRP HKSQPGIGSM LLGLYDGDQM AMVGGASAFT 250
    AARRIELLAE LDELRVGDDV VADGAPTRWQ SGNDRTWVPL RPERVVEVAY 300
    DQMEGARFRH AARFLRWRPD RTPDECTFQQ LEVPVRYDLA DVLAGGS 347
    Length:347
    Mass (Da):38,304
    Last modified:May 26, 2009 - v1
    Checksum:i66A589E3487652BE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011115 Genomic DNA. Translation: BAH53415.1.
    RefSeqiWP_015888921.1. NC_012522.1.
    YP_002782360.1. NC_012522.1.

    Genome annotation databases

    EnsemblBacteriaiBAH53415; BAH53415; ROP_51680.
    GeneIDi7743262.
    KEGGirop:ROP_51680.
    PATRICi23227709. VBIRhoOpa21106_5227.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP011115 Genomic DNA. Translation: BAH53415.1 .
    RefSeqi WP_015888921.1. NC_012522.1.
    YP_002782360.1. NC_012522.1.

    3D structure databases

    ProteinModelPortali C1AUS5.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 632772.ROP_51680.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAH53415 ; BAH53415 ; ROP_51680 .
    GeneIDi 7743262.
    KEGGi rop:ROP_51680.
    PATRICi 23227709. VBIRhoOpa21106_5227.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi YRPHKSQ.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci ROPA632772:GH0Q-5211-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
      Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
      Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: B4Imported.

    Entry informationi

    Entry nameiC1AUS5_RHOOB
    AccessioniPrimary (citable) accession number: C1AUS5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3