C1AUD6 (C1AUD6_RHOOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Proline iminopeptidase RuleBase RU003421
EC=3.4.11.5 RuleBase RU003421

Gene names

Name:	pip EMBL BAH49144.1
Ordered Locus Names:	ROP_08970

Organism

Rhodococcus opacus (strain B4) [Complete proteome] [HAMAP]

Taxonomic identifier

632772 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	321 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Release of N-terminal proline from a peptide. RuleBase RU003421
Sequence similarities	Belongs to the peptidase S33 family. RuleBase RU003421

Ontologies

Keywords
Molecular function	Aminopeptidase RuleBase RU003421 EMBL BAH49144.1 Hydrolase Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	aminopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	117	1	Nucleophile By similarity PIRSR PIRSR006431-1
	Active site	273	1	By similarity PIRSR PIRSR006431-1
	Active site	301	1	Proton donor By similarity PIRSR PIRSR006431-1

Sequences

	Sequence		Length	Mass (Da)
	C1AUD6 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 5106A240BFF4D4B8	FASTA	321	35,745
	10 20 30 40 50 60 MTALRTLYPP LEPYQFGHLD VGDGQQMYWE QSGNPDGKPV VFLHGGPGGG TDPAQRQFFD 70 80 90 100 110 120 PQVYRIVLLD QRGCGRSTPH VADGADLSVN TTDRLLADIE MLREHLGIDR WQVFGGSWGS 130 140 150 160 170 180 TLALAYAQKH PHRVTELVLR GIFLLRRSEI DWYYNGGAGR LFPELWEKFL APVPESERGG 190 200 210 220 230 240 DLVEAYHRLL HSDDADVATR AAVAWSTWEG ATSSLLPKPE RVVETSQPRF ALAFARIENH 250 260 270 280 290 300 YFHHRGFLDE GQLLRDAAAL DGLPGVIVQG RYDVVCPAAS AWALHRAWPG SRLEVVDDAG 310 320 HSAMEPGIVH HLIEATDRFR A

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011115 Genomic DNA. Translation: BAH49144.1.
RefSeq	YP_002778089.1. NC_012522.1.
3D structure databases
ProteinModelPortal	C1AUD6.
ModBase	Search...
Protein-protein interaction databases
STRING	C1AUD6.
Protein family/group databases
MEROPS	S33.001.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7747932.
GenomeReviews	Gene locus ROP_08970 in contig AP011115_GR.
KEGG	rop:ROP_08970.
PATRIC	23218969. VBIRhoOpa21106_0897.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	AELDWYY.
ProtClustDB	CLSK758158.
Family and domain databases
InterPro	IPR000073. AB_hydrolase_1. IPR005944. Pept_S33. IPR002410. Peptidase_S33. [Graphical view]
KO	K01259.
PANTHER	PTHR10992:SF12. PTHR10992:SF12. 1 hit.
Pfam	PF00561. Abhydrolase_1. 1 hit. [Graphical view]
PIRSF	PIRSF006431. Pept_S33. 1 hit.
PRINTS	PR00111. ABHYDROLASE. PR00793. PROAMNOPTASE.
TIGRFAMs	TIGR01249. Pro_imino_pep_1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1AUD6_RHOOB

Accession

Primary (citable) accession number: C1AUD6

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)