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C1AU50 (C1AU50_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL BAH49058.1
Gene names
Ordered Locus Names:ROP_08110
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP]
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length257 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Sequence similarities

Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue551N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
C1AU50 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 8CF687ABBE943C16

FASTA25727,324
        10         20         30         40         50         60 
MTAVGGGEGF GVGVETMSRT GDIEAALGAV RARLDAACLQ AGRDPAEVSL LPVTKFFPES 

        70         80         90        100        110        120 
DARILYDLGC REFGESREQE ATAKIAEFRT AVTDPSVRWH MIGHLQRNKA KAVAHWAYAI 

       130        140        150        160        170        180 
HSVDSERLVG ALGRAAAAAL EAGERPAPLR VLLQVSLDGD PQRGGAAIAD LDRLAAQVQS 

       190        200        210        220        230        240 
SPGLEYRGLM AVPPIDADPD AAFEELHKIH ARLRRDHPDA TELSAGMTND LEHAVRHGST 

       250 
CVRVGTALLG ARPITSK

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP011115 Genomic DNA. Translation: BAH49058.1.
RefSeqYP_002778003.1. NC_012522.1.

3D structure databases

ProteinModelPortalC1AU50.
ModBaseSearch...

Protein-protein interaction databases

STRINGC1AU50.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7747891.
GenomeReviewsGene locus ROP_08110 in contig AP011115_GR.
KEGGrop:ROP_08110.
PATRIC23218795. VBIRhoOpa21106_0810.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAAENREQE.
ProtClustDBCLSK711718.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
PROSITEPS01211. UPF0001. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1AU50_RHOOB
AccessionPrimary (citable) accession number: C1AU50
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info