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C1AT05 (C1AT05_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phenylalanine--tRNA ligase alpha chain HAMAP MF_00281
EC=6.1.1.20 HAMAP MF_00281
Alternative name(s):
Phenylalanyl-tRNA synthetase alpha chain HAMAP MF_00281
Gene names
Name:pheS HAMAP MF_00281 EMBL BAH48937.1
Ordered Locus Names:ROP_06900
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP]
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length361 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe). HAMAP MF_00281

Cofactor

Binds 2 magnesium ions per tetramer By similarity. HAMAP MF_00281

Subunit structure

Tetramer of two alpha and two beta chains By similarity. HAMAP MF_00281

Subcellular location

Cytoplasm By similarity HAMAP MF_00281.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha chain type 1 subfamily. HAMAP MF_00281

Sequences

Sequence LengthMass (Da)Tools
C1AT05 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: F6AC6C2227DF229B

FASTA36139,011
        10         20         30         40         50         60 
MAKKEGAASA GVEGGAVDAS ALTEDALTAA AESAEKAFAS VADLDDLAKA KVEHMGDKSP 

        70         80         90        100        110        120 
IALARRGLGA LPGKEKADAG KRVNVARTRI SAAFDERRAV LLAERDAAVL VAEAIDVTLP 

       130        140        150        160        170        180 
SQRQPVGARH PISIISEQVE DVFVAMGWEV AEGPEVETEH FNFDALNFLP DHPARTMQDT 

       190        200        210        220        230        240 
FHIAPEGSRQ VLRTHTSPVQ VRTMLSREVP IYVVCPGRTF RTDELDATHT PVFSQVEGLA 

       250        260        270        280        290        300 
VDKGLTMAHL RGTLDAFARA LFGPETRTRM RPNYFPFTEP SAEVDVWFPN KKGGAGWVEW 

       310        320        330        340        350        360 
GGCGMVNPNV LRASGIDPDV YTGFAFGMGL ERTLQFRNGI PDMRDIVEGD VRFTLPFGVQ 


G

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References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP011115 Genomic DNA. Translation: BAH48937.1.
RefSeqYP_002777882.1. NC_012522.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC1AT05.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7742093.
GenomeReviewsGene locus ROP_06900 in contig AP011115_GR.
KEGGrop:ROP_06900.
PATRIC23218545. VBIRhoOpa21106_0686.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAFRASYFP.
ProtClustDBPRK00488.

Family and domain databases

HAMAPMF_00281. Phe_tRNA_synth_alpha1.
[Tree]
InterProIPR006195. aa-tRNA-synth_II.
IPR004529. Phe-tRNA-synth_IIc_asu.
IPR004188. Phe-tRNA_synth_II_N.
IPR022911. Phe_tRNA_synth_alpha1_bac.
IPR002319. Phenylalanyl-tRNA_Synthase.
IPR010978. tRNA-bd_arm.
[Graphical view]
KOK01889.
PfamPF02912. Phe_tRNA-synt_N. 1 hit.
PF01409. tRNA-synt_2d. 1 hit.
[Graphical view]
SUPFAMSSF46589. tRNA_binding_arm. 1 hit.
TIGRFAMsTIGR00468. PheS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1AT05_RHOOB
AccessionPrimary (citable) accession number: C1AT05
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: January 25, 2012
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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