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C1ASU9 (C1ASU9_RHOOB) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G 1 HAMAP MF_00641
EC=2.3.3.9 HAMAP MF_00641
Gene names
Name:glcB EMBL BAH48881.1
Synonyms:glcB1 HAMAP MF_00641
Ordered Locus Names:ROP_06340
OrganismRhodococcus opacus (strain B4) [Complete proteome] [HAMAP]
Taxonomic identifier632772 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length726 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3391Proton acceptor By similarity HAMAP MF_00641
Active site6331Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
C1ASU9 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: B67EA5B820EB0E22

FASTA72678,776
        10         20         30         40         50         60 
MTERVEVGGL QVAKVLYDFV NEEALPGTGI DVDGFWSGAV KVIEDLAPRN RSLLAVRDDL 

        70         80         90        100        110        120 
QARIDTWHRD HTGTPDPAEY RQFLTSIGYL VPEPGPFAVS TANVDAEITS TAGPQLVVPV 

       130        140        150        160        170        180 
LNARFALNAA NARWGSLYDA LYGTNAIGVD GGAEPGDSYN RVRGDRVIAW ARNFLDTAAP 

       190        200        210        220        230        240 
LRSGSHADAA RYTVDGGALA VALADGTSTG LADPGKFVGY LGDPAAPSSV LLRNHGLHAE 

       250        260        270        280        290        300 
IQIDPTSPIG QTDAAGVQDV VLESAVTTIM DFEDSVAAVD ADDKVIGYRN WLGLNRGDLT 

       310        320        330        340        350        360 
EELTKGGQAF TRRLNPDRTY TAPDGGELTL HGRSLLFVRN VGHLMSTPAI LHPDGTEIPE 

       370        380        390        400        410        420 
GILDALLTSL CAIHGLSRSE QTGPLDNSRT GSIYIVKPKQ HGPDEVAFTT DLFGRVEQVL 

       430        440        450        460        470        480 
NLPANTIKVG IMDEERRTTV NLAACIHEAR ERVVFINTGF LDRTGDEIHT SMEAGPMIRK 

       490        500        510        520        530        540 
AEMKQQTWIS AYEDWNVDIG LACGLQGRAQ IGKGMWAMTE LMAEMLEQKI GHPKAGANTA 

       550        560        570        580        590        600 
WVPSPTGATL HATHYHQVDV FAVQDELKGT RRAGLDQILT IPLAPDTDWT EEQKQEELDN 

       610        620        630        640        650        660 
NCQSILGYVV RWIDAGVGCS KVPDIHDVAL MEDRATLRIS SQLLANWIRH GVVTAEQVVA 

       670        680        690        700        710        720 
SLQRMAPVVD RQNQGDPTYR PLAPDFDTNI AFQAAKELIL DGTTQPSGYT EPILHRRRRE 


YKAANA

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP011115 Genomic DNA. Translation: BAH48881.1.
RefSeqYP_002777826.1. NC_012522.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC1ASU9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7747782.
GenomeReviewsGene locus ROP_06340 in contig AP011115_GR.
KEGGrop:ROP_06340.
PATRIC23218423. VBIRhoOpa21106_0629.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAPKMHGPD.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1ASU9_RHOOB
AccessionPrimary (citable) accession number: C1ASU9
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info