C1A2J5 (C1A2J5_RHOE4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL BAH34830.1
EC=1.2.4.2 EMBL BAH34830.1

Gene names

Name:	sucA EMBL BAH34830.1
Ordered Locus Names:	RER_41220

Organism

Rhodococcus erythropolis (strain PR4 / NBRC 100887) [Complete proteome] [HAMAP]

Taxonomic identifier

234621 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	1253 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Molecular function	Oxidoreductase EMBL BAH34830.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1A2J5 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 4249D49D2E15DF13	FASTA	1,253	137,038
	10 20 30 40 50 60 MSSSSTSQFG QNQWLVDEMY QRFQDDPSSV DPSWHEFLTD YSPDSANTGG GNGTASNGNA 70 80 90 100 110 120 AAPAAVVAPP AAPKATPPAP KTAPPAPPAK AAAPAPAKTA APAAKAAPAK PAAAKPAAAP 130 140 150 160 170 180 AKPAPAGGAE ETKVLRGAAA AVVKNMSLSL EIPTATSVRA IPAKLMFDNR IVINNHLART 190 200 210 220 230 240 RGGKISFTHL LGYAIVQAVN AFPNMNRHFA EIDGKPNAVT PEHTNLGLAI DLPGKDGNRS 250 260 270 280 290 300 LVVAAIRNTE SMNFVQFHAA YEDIVRRARE GKLTGEDFTG VTISLTNPGG IGTVHSVPRL 310 320 330 340 350 360 MKGQGAIIGA GAMEYPAEFQ GASDEKLAEM GVGKLMTLTS TYDHRIIQGA ESGDFLRTIH 370 380 390 400 410 420 NLLISDEFYD EIFHALGNPY EPVRWRKDVP EGAVDKNTRV LELIAAYRDR GHLMADTDPL 430 440 450 460 470 480 QFVKDKFHSH PDLDVISHGL TLWDLDREFK VGGFHGQEKM KLRDVLSVLR DAYCRHVGVE 490 500 510 520 530 540 YTHILETDQR QWIQDRVEGH HAKPSVAQQK YILSKLNAAE AFETFLQTKY VGQKRFSLEG 550 560 570 580 590 600 AEAVIPMMDA VIDQAAEHQL DEVVIGMPHR GRLNVLANIV GKPYSKIFTE FEGNMNPAAA 610 620 630 640 650 660 HGSGDVKYHL GASGTYIQMF GDNDIAVSLT ANPSHLEAVD PVLEGLVRAK QDILDKGEEG 670 680 690 700 710 720 FTVLPLMLHG DAAFAGQGVV AETLNLSLLR GYRTGGTVHI VVNNQVGFTT APEHSRSSEY 730 740 750 760 770 780 CTDVAKMIAA PVFHVNGDDP EACVWVAQLA VDFREKFGKD VVIDLICYRR RGHNEGDDPS 790 800 810 820 830 840 MTQPAMYDVI DTKRSVRKSY TESLIGRGDI SLKEAEDALR DYQGQLERVF NEVRELEKFQ 850 860 870 880 890 900 PEPSESVELD QTPPARLTTA VAPEVLERIG DAFVNVPDGF TVHPRVKPVA EKRREMAREG 910 920 930 940 950 960 HVDWAFAELL AFGSLAEQGA LIRLAGQDSK RGTFTQRHSV LIDRKTGNEY SPIAKIAADA 970 980 990 1000 1010 1020 ENGGKFMVYD SALTEYAGLG FEYGYSVGNP DALVLWEAQF GDFVNGAQTI IDEFISSGEA 1030 1040 1050 1060 1070 1080 KWGQLSDVVL LLPHGHEGQG PDHTSGRIER FLQLCAEGSM TVAVPSTPAS YFHLLRRHHL 1090 1100 1110 1120 1130 1140 DGIRRPLVVF TPKSMLRNKA AVSNVEDFTT GKFRSVFEEP AFESGESARE SVKRVLLVSG 1150 1160 1170 1180 1190 1200 KLYWELLAKK HKDERDDIAI VRMEQLYPVP KRRLKETLDR YPNADQFRWV QEEPANQGAW 1210 1220 1230 1240 1250 PFLGLALPDL LPETLTGIKR ISRRPMSAPS SGSSKVHAVE QQEILDEAFL PTN

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008957 Genomic DNA. Translation: BAH34830.1.
RefSeq	YP_002767569.1. NC_012490.1.
3D structure databases
ProteinModelPortal	C1A2J5.
ModBase	Search...
Protein-protein interaction databases
STRING	C1A2J5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7714626.
GenomeReviews	Gene locus RER_41220 in contig AP008957_GR.
KEGG	rer:RER_41220.
PATRIC	23194801. VBIRhoEry66701_4660.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	EGDEPAF.
ProtClustDB	PRK12270.
Family and domain databases
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
Gene3D	G3DSA:3.30.559.10. CAT-like_dom. 1 hit.
KO	K01616.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1A2J5_RHOE4

Accession

Primary (citable) accession number: C1A2J5

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)