C1A1Y2 (C1A1Y2_RHOE4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
ATP synthase subunit b RuleBase RU003849

Gene names

Name:	atpF EMBL BAH34617.1
Ordered Locus Names:	RER_39090

Organism

Rhodococcus erythropolis (strain PR4 / NBRC 100887) [Complete proteome] [HAMAP]

Taxonomic identifier

234621 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	185 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Component of the F0 channel, it forms part of the peripheral stalk, linking F1 to F0 By similarity. SAAS SAAS005864 F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation By similarity. SAAS SAAS005864
Subunit structure	F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14) By similarity. RuleBase RU003849
Sequence similarities	Belongs to the ATPase B chain family. RuleBase RU003848

Ontologies

Keywords
Biological process	ATP synthesis SAAS SAAS005864 Hydrogen ion transport Ion transport Transport
Cellular component	CF(0) RuleBase RU003848 SAAS SAAS005864 Cell membrane SAAS SAAS005864 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS005864
Molecular function	Hydrolase EMBL BAH34617.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ATP synthesis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW proton-transporting ATP synthase complex, coupling factor F(o) Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	hydrogen ion transmembrane transporter activity Inferred from electronic annotation. Source: InterPro hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1A1Y2 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: F763700CD8346FE6	FASTA	185	20,158
	10 20 30 40 50 60 MGATFAVLAA TEETHNPLLP ETYDIVWSAV ALVVVGFVFW KLVLPKFQKV LAERTEQIEG 70 80 90 100 110 120 GIKKAEDAQA EAAAALEQYR AQLAEARTEA AQIREEARTQ GQQIIADMKV QAQDESDRIV 130 140 150 160 170 180 AAGHSQLVAQ RQQIVAELRS DLGKTAVDLA EKVIGESLAD DVKRAGTVDR FLNELDTVSA DSARK

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008957 Genomic DNA. Translation: BAH34617.1.
RefSeq	YP_002767356.1. NC_012490.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1A1Y2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7714554.
GenomeReviews	Gene locus RER_39090 in contig AP008957_GR.
KEGG	rer:RER_39090.
PATRIC	23194355. VBIRhoEry66701_4442.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	LEKYNAQ.
ProtClustDB	PRK05759.
Family and domain databases
HAMAP	MF_01398. ATP_synth_b_bact. [Tree]
InterPro	IPR002146. ATPase_F0-cplx_b/b'su_bac. IPR005864. ATPase_F0-cplx_bsu_bac. [Graphical view]
KO	K02109.
Pfam	PF00430. ATP-synt_B. 1 hit. [Graphical view]
TIGRFAMs	TIGR01144. ATP_synt_b. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1A1Y2_RHOE4

Accession

Primary (citable) accession number: C1A1Y2

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)