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C1A0W1 (C1A0W1_RHOE4) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length463 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
C1A0W1 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 35D846558142E709

FASTA46352,181
        10         20         30         40         50         60 
MPEPRRSDHT DYVAVNPIFS RPGEDSVASK YTLEPDGMLP ETAYQIVHDE TMLDGNARLN 

        70         80         90        100        110        120 
LATFVSTWMD DHATKLYTES FDKNMIDKDE YPQTAAIETY CWRILADLWH SPSPKDAIGT 

       130        140        150        160        170        180 
STIGSSEACM LGGLAMKRRW QHARKAAGKS TEKPNLIMSS AVQVCWEKFC NYWDVEARYV 

       190        200        210        220        230        240 
PISEEHRTLD GHDLDKYVDE NTIGVIAIMG VTYTGMYEPV LEISKALDAI QEKTGLDVPI 

       250        260        270        280        290        300 
HVDGASGAMI APFLQPELEW DFRLPRVHSI NTSAHKYGLV YPGLGWVVWR SQDLLPDDLV 

       310        320        330        340        350        360 
FKVSYLGGSM PTFALNFSRP GAQVILQFYL FLRLGHDGYR AIQQSSQDVA KFLAEGIGKL 

       370        380        390        400        410        420 
DAFELWNDGS DIPVFAWRLA EGHTSNWTLY DLSDRLRGKG WLVPAYPMPD DLADLTVQRI 

       430        440        450        460 
VVRNGLSMDL AANLLRIIEE ETAFLDELDS PMPRPRVTEG FHH 

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References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008957 Genomic DNA. Translation: BAH34246.1.
RefSeqYP_002766985.1. NC_012490.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING234621.RER_35380.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAH34246; BAH34246; RER_35380.
GeneID7712601.
KEGGrer:RER_35380.
PATRIC23193552. VBIRhoEry66701_4054.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000070228.
KOK01580.
OMAIADLWNA.
OrthoDBEOG6TFCPW.
ProtClustDBCLSK925941.

Enzyme and pathway databases

BioCycRERY234621:GHDE-3579-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC1A0W1_RHOE4
AccessionPrimary (citable) accession number: C1A0W1
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: February 19, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)