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C1A0W1

- C1A0W1_RHOE4

UniProt

C1A0W1 - C1A0W1_RHOE4

Protein

Glutamate decarboxylase

Gene

RER_35380

Organism
Rhodococcus erythropolis (strain PR4 / NBRC 100887)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (26 May 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciRERY234621:GHDE-3579-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:RER_35380Imported
    OrganismiRhodococcus erythropolis (strain PR4 / NBRC 100887)Imported
    Taxonomic identifieri234621 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
    ProteomesiUP000002204: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi234621.RER_35380.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiPTFQINF.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C1A0W1-1 [UniParc]FASTAAdd to Basket

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    MPEPRRSDHT DYVAVNPIFS RPGEDSVASK YTLEPDGMLP ETAYQIVHDE    50
    TMLDGNARLN LATFVSTWMD DHATKLYTES FDKNMIDKDE YPQTAAIETY 100
    CWRILADLWH SPSPKDAIGT STIGSSEACM LGGLAMKRRW QHARKAAGKS 150
    TEKPNLIMSS AVQVCWEKFC NYWDVEARYV PISEEHRTLD GHDLDKYVDE 200
    NTIGVIAIMG VTYTGMYEPV LEISKALDAI QEKTGLDVPI HVDGASGAMI 250
    APFLQPELEW DFRLPRVHSI NTSAHKYGLV YPGLGWVVWR SQDLLPDDLV 300
    FKVSYLGGSM PTFALNFSRP GAQVILQFYL FLRLGHDGYR AIQQSSQDVA 350
    KFLAEGIGKL DAFELWNDGS DIPVFAWRLA EGHTSNWTLY DLSDRLRGKG 400
    WLVPAYPMPD DLADLTVQRI VVRNGLSMDL AANLLRIIEE ETAFLDELDS 450
    PMPRPRVTEG FHH 463
    Length:463
    Mass (Da):52,181
    Last modified:May 26, 2009 - v1
    Checksum:i35D846558142E709
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008957 Genomic DNA. Translation: BAH34246.1.
    RefSeqiYP_002766985.1. NC_012490.1.

    Genome annotation databases

    EnsemblBacteriaiBAH34246; BAH34246; RER_35380.
    GeneIDi7712601.
    KEGGirer:RER_35380.
    PATRICi23193552. VBIRhoEry66701_4054.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008957 Genomic DNA. Translation: BAH34246.1 .
    RefSeqi YP_002766985.1. NC_012490.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 234621.RER_35380.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAH34246 ; BAH34246 ; RER_35380 .
    GeneIDi 7712601.
    KEGGi rer:RER_35380.
    PATRICi 23193552. VBIRhoEry66701_4054.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi PTFQINF.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci RERY234621:GHDE-3579-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
      Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
      Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PR4 / NBRC 100887Imported.
    2. "Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4."
      Sekine M., Tanikawa S., Omata S., Saito M., Fujisawa T., Tsukatani N., Tajima T., Sekigawa T., Kosugi H., Matsuo Y., Nishiko R., Imamura K., Ito M., Narita H., Tago S., Fujita N., Harayama S.
      Environ. Microbiol. 8:334-346(2006)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PR4 / NBRC 100887Imported.

    Entry informationi

    Entry nameiC1A0W1_RHOE4
    AccessioniPrimary (citable) accession number: C1A0W1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 26, 2009
    Last sequence update: May 26, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3