C1A0V4 (C1A0V4_RHOE4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase III alpha subunit EMBL BAH34239.1
EC=2.7.7.7 EMBL BAH34239.1

Gene names

Name:	dnaE EMBL BAH34239.1
Ordered Locus Names:	RER_35310

Organism

Rhodococcus erythropolis (strain PR4 / NBRC 100887) [Complete proteome] [HAMAP]

Taxonomic identifier

234621 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	1202 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). SAAS SAAS004013

Ontologies

Keywords
Biological process	DNA replication SAAS SAAS004013
Cellular component	Cytoplasm SAAS SAAS004013
Molecular function	DNA-directed DNA polymerase SAAS SAAS004013 Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	3'-5' exonuclease activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C1A0V4 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 172E6760F84CD7AE	FASTA	1,202	131,322
	10 20 30 40 50 60 MAVAERVGNA AYTRSRSQTF REAHVADSFV HLHNHTEYSM LDGAAKVGAM FEEAARLEMT 70 80 90 100 110 120 AVGMTDHGNM YGASQFYNEA KSAGIKPIIG IEAYIAPESR FNTKRVLWGD RSQKSDDVSG 130 140 150 160 170 180 SGAYTHMTMV AENATGLRNL FKLSSLASIE GQLGKWPRMD EELIAAHAEG IIATTGCPSG 190 200 210 220 230 240 EIQTRLRLGH DREALEAAAK WQEIWGPDNF FLELMDHGLS IERRVREGLL DIGKQLGIPP 250 260 270 280 290 300 LATNDCHYVT KDAAENHEAL LCIQTGKTLS DPTRFKFDGD GYYLKSAAEM RAIWDNEVPG 310 320 330 340 350 360 ACDNTVAIGE RVQSYEDVWA FHDRMPIFPV PEGHTQQTFL RAEVMRGLDR RFPSGPPQEY 370 380 390 400 410 420 LARADYEIGV INEMGFPAYF LVVGDLINHA KDVGIRVGPG RGSAAGSLVA YAMGITNIDP 430 440 450 460 470 480 IPYGLLFERF LNPERVSMPD IDIDFDDRRR GEMVRYATDK WGNDKVAQVI TFGTIKTKAA 490 500 510 520 530 540 IKDSARVQFG KPGFAIADQI TKALPPPIMA KDISVSGITD PKHERYKEAV EVRALIDSSP 550 560 570 580 590 600 DVAKIYKTAV GLEGLIRNAG VHACAVIMSS EPLTDAIPVW KRAQDGAIIT GWDYPSCEAI 610 620 630 640 650 660 GLLKMDFLGL RNLTVIGDTL ENIKANRGID LDLDTLPMDD AATYELLARG DTLGVFQLDG 670 680 690 700 710 720 GGMRELLKLM QPTGFGDIVA ALALYRPGPM GVDAHISYAK RKNALEDVKP IHPELEEPLA 730 740 750 760 770 780 EILSETYGLI IYQEQIMQLA QKVAGYTLGQ ADLLRRAMGK KKLSELEKAY AGFRQGMLDN 790 800 810 820 830 840 NFSEAAIKAL WDTVLPFAGY AFNKSHSAGY GLVSYWTAYL KANYPAEYMA GLLTSVGDDK 850 860 870 880 890 900 DKSAIYLADC RKLGITVLPP DVNESRVDFA TVGDDIRFGM GSVRNVGANV VASIIKARTE 910 920 930 940 950 960 KSKFTDFSDY LGKIDAMACN KKVTESLIKA GAFDSLGHPR KGLMLVHADA IDSVMSTKKA 970 980 990 1000 1010 1020 EAIGQFDLFG GAEADESITS VFDVKIPEEE WDSKHRLALE REMLGLYVSG HPLNGVEHIL 1030 1040 1050 1060 1070 1080 RQQSDTSIAA ILEGGVQDGA QVTLGGIIAS VDRRVNKNGL TWCIVQLEDL VGGIEVLFFP 1090 1100 1110 1120 1130 1140 QAYAVYGMDI AEDAIVLVKA RVSIRDDRMS LIGNDLAVPD ISAIGVARPL SVSLPLRQCT 1150 1160 1170 1180 1190 1200 KDKLSALKQV LTRHPGTSDV HVRLIGGTEI SLWKVDDVLR VEPSSALMGD LKALLGPSCL TV

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008957 Genomic DNA. Translation: BAH34239.1.
RefSeq	YP_002766978.1. NC_012490.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C1A0V4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7715049.
GenomeReviews	Gene locus RER_35310 in contig AP008957_GR.
KEGG	rer:RER_35310.
PATRIC	23193538. VBIRhoEry66701_4047.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	RVLQMPY.
ProtClustDB	PRK05673.
Family and domain databases
InterPro	IPR011708. DNA_pol3_alpha. IPR004365. NA-bd_OB_tRNA-helicase. IPR004013. PHP_C. IPR003141. Pol/His_phosphatase_N. IPR016195. Pol/histidinol_Pase-like. IPR004805. PolC_alpha. [Graphical view]
KO	K02337.
Pfam	PF07733. DNA_pol3_alpha. 1 hit. PF02811. PHP. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
SMART	SM00481. POLIIIAc. 1 hit. [Graphical view]
SUPFAM	SSF89550. PHP-like. 1 hit.
TIGRFAMs	TIGR00594. Polc. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C1A0V4_RHOE4

Accession

Primary (citable) accession number: C1A0V4

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)