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C1A050 (C1A050_RHOE4) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Argininosuccinate lyase HAMAP MF_00006
Short name=ASAL HAMAP MF_00006
EC=4.3.2.1 HAMAP MF_00006
Alternative name(s):
Arginosuccinase HAMAP MF_00006
Gene names
Name:argH HAMAP MF_00006 EMBL BAH33985.1
Ordered Locus Names:RER_32770
OrganismRhodococcus erythropolis (strain PR4 / NBRC 100887) [Complete proteome] [HAMAP]
Taxonomic identifier234621 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine. HAMAP MF_00006

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. HAMAP MF_00006

Subcellular location

Cytoplasm By similarity HAMAP MF_00006.

Sequence similarities

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. HAMAP MF_00006

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Arginine biosynthesis HAMAP MF_00006
   Cellular componentCytoplasm HAMAP MF_00006
   Molecular functionLyase HAMAP MF_00006 EMBL BAH33985.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processarginine biosynthetic process via ornithine

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionargininosuccinate lyase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C1A050 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 33FB5DD1F3037C1B

FASTA48050,845
        10         20         30         40         50         60 
MTAHGDGDAQ KHGTNEGALW GGRFESGPAA AMAALSKSTH FDWVLAPYDV RASQAHARVL 

        70         80         90        100        110        120 
NKAGLLSEAD LVTMLDGLDR LAADVASGAF GPSDSDEDVH GALERGLIER VGPEVGGRLR 

       130        140        150        160        170        180 
AGRSRNDQVA TLFRMWLRDA VRRISTGVLD VVDALATQAG AHPDAVMPGK THLQAAQPVL 

       190        200        210        220        230        240 
LAHHLLAHAH PLLRDVQRLR DFDVRAAVSP YGSGALAGSS LGLDPEAIAA ELKFDSSAEN 

       250        260        270        280        290        300 
SIDATASRDF AAEAAFVLAM IGVDLSRMAE EIIIWSTPEF GYITLADAWS TGSSIMPQKK 

       310        320        330        340        350        360 
NPDVSELTRG KSGRLIGNLT GLLATLKAQP LAYNRDLQED KEPVFDSVAQ LEMLLPAITG 

       370        380        390        400        410        420 
LVQTLEFHTA RMAELAPAGF TLATDIAEWM VRQGVPFRVA HEAAGACVRV AEARGVGLED 

       430        440        450        460        470        480 
LTDEELAGVD SALTPAVREV LTVEGSIASR NARGGTAGVR VAEQLDGVRA VAQSLREWTL

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008957 Genomic DNA. Translation: BAH33985.1.
RefSeqYP_002766724.1. NC_012490.1.

3D structure databases

ProteinModelPortalC1A050.
ModBaseSearch...

Protein-protein interaction databases

STRINGC1A050.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7714597.
GenomeReviewsGene locus RER_32770 in contig AP008957_GR.
KEGGrer:RER_32770.
PATRIC23193010. VBIRhoEry66701_3784.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAMPGRTHL.
ProtClustDBPRK00855.

Family and domain databases

HAMAPMF_00006. Arg_succ_lyase.
[Tree]
InterProIPR009049. Argininosuccinate_lyase.
IPR003031. D_crystallin.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR022761. Lyase1_N.
[Graphical view]
KOK01755.
PANTHERPTHR11444:SF3. argH. 1 hit.
PfamPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00838. ArgH. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC1A050_RHOE4
AccessionPrimary (citable) accession number: C1A050
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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