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C0ZY16 (EFTS_RHOE4) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Ts
Short name=EF-Ts
Gene names
Name:tsf
Ordered Locus Names:RER_25430
OrganismRhodococcus erythropolis (strain PR4 / NBRC 100887) [Complete proteome] [HAMAP]
Taxonomic identifier234621 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length275 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome By similarity. HAMAP MF_00050

Subcellular location

Cytoplasm By similarity HAMAP MF_00050.

Sequence similarities

Belongs to the EF-Ts family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   Molecular functionElongation factor
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiontranslation elongation factor activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 275275Elongation factor Ts HAMAP MF_00050
PRO_1000202250

Regions

Region76 – 794Involved in Mg(2+) ion dislocation from EF-Tu By similarity

Sequences

Sequence LengthMass (Da)Tools
C0ZY16 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 256E514E1BEA53BE

FASTA27529,250
        10         20         30         40         50         60 
MANYTAADVK RLRELTGSGM MACKNALADA DGDFDKAVEQ LRIKGAKDVG KRAERTTAEG 

        70         80         90        100        110        120 
LVVAKDGVMI EINCETDFVA KNDEFIKLAD EIVTVAAAGK PADLDALKAL ELDGKTIDTV 

       130        140        150        160        170        180 
IAEQSAKIGE KLELSRVASF DGPVAVYLHK RSSDLPPAVG VLIEYTGEGD AAAEAARGAA 

       190        200        210        220        230        240 
MQVAALKAKY VTRDEVPAEI VASERHIAEE TARAEGKPEQ ALPKIIEGRV NGFFKDVVLT 

       250        260        270 
EQSSVTDSKK TVKAILDEAG VTIKRFVRFE VGASA

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008957 Genomic DNA. Translation: BAH33251.1.
RefSeqYP_002765990.1. NC_012490.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC0ZY16.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7712519.
GenomeReviewsGene locus RER_25430 in contig AP008957_GR.
KEGGrer:RER_25430.
PATRIC23191478. VBIRhoEry66701_3031.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAYLHGTRI.
ProtClustDBPRK09377.

Family and domain databases

HAMAPMF_00050. EF_Ts.
[Tree]
InterProIPR001816. Transl_elong_EFTs/EF1B.
IPR014039. Transl_elong_EFTs/EF1B_dimer.
IPR018101. Transl_elong_Ts_CS.
IPR009060. UBA-like.
IPR000449. UBA/transl_elong_EF1B_N.
[Graphical view]
Gene3DG3DSA:3.30.479.20. Transl_elong_EFTs/EF1B_dimer. 3 hits.
KOK02357.
PANTHERPTHR11741. Transl_elong_EFTs/EF1B. 1 hit.
PfamPF00889. EF_TS. 1 hit.
PF00627. UBA. 1 hit.
[Graphical view]
SUPFAMSSF54713. EF_TS. 2 hits.
SSF46934. UBA_like. 1 hit.
TIGRFAMsTIGR00116. Tsf. 1 hit.
PROSITEPS01126. EF_TS_1. 1 hit.
PS01127. EF_TS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameEFTS_RHOE4
AccessionPrimary (citable) accession number: C0ZY16
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: May 26, 2009
Last modified: January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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