C0ZW36 (C0ZW36_RHOE4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L24 HAMAP MF_01326

Gene names

Name:	rplX HAMAP MF_01326 EMBL BAH32571.1
Ordered Locus Names:	RER_18630

Organism

Rhodococcus erythropolis (strain PR4 / NBRC 100887) [Complete proteome] [HAMAP]

Taxonomic identifier

234621 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length	106 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit By similarity. HAMAP MF_01326 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit By similarity. HAMAP MF_01326
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01326
Sequence similarities	Belongs to the ribosomal protein L24P family. HAMAP MF_01326 RuleBase RU003477

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01326
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01326 RuleBase RU003477 EMBL BAH32571.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C0ZW36 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: E78AB3865825A7C2	FASTA	106	11,265
	10 20 30 40 50 60 MMKVHKGDTV LVIAGKDKGA KGKVIQAYPA TDKVLVEGVN RIKKHTAVSA NERGASSGGI 70 80 90 100 VTQEAPIHVS NVAVVDSDGN PTRVGYRTDE ESGKRVRISR KNGKDI

References

[1]

"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4." Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008957 Genomic DNA. Translation: BAH32571.1.
RefSeq	YP_002765310.1. NC_012490.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C0ZW36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7712492.
GenomeReviews	Gene locus RER_18630 in contig AP008957_GR.
KEGG	rer:RER_18630.
PATRIC	23190122. VBIRhoEry66701_2358.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	KPTRVGY.
ProtClustDB	PRK00004.
Family and domain databases
HAMAP	MF_01326_B. Ribosomal_L24_B. [Tree]
InterPro	IPR005824. KOW. IPR003256. Ribosomal_L24. IPR005825. Ribosomal_L24/26_CS. IPR014723. Ribosomal_L24_SH3-like. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.200. Ribosomal_L24_SH3-like. 1 hit.
KO	K02895.
PANTHER	PTHR12903. Ribosomal_L24. 1 hit.
Pfam	PF00467. KOW. 1 hit. [Graphical view]
SMART	SM00739. KOW. 1 hit. [Graphical view]
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01079. RplX_bact. 1 hit.
PROSITE	PS01108. RIBOSOMAL_L24. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C0ZW36_RHOE4

Accession

Primary (citable) accession number: C0ZW36

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)