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Protein
Submitted name:

Putative formyltransferase

Gene

RER_09720

Organism
Rhodococcus erythropolis (strain PR4 / NBRC 100887)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Enzyme and pathway databases

BioCyciRERY234621:GHDE-989-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative formyltransferaseImported (EC:2.1.2.-Imported)
Gene namesi
Ordered Locus Names:RER_09720Imported
OrganismiRhodococcus erythropolis (strain PR4 / NBRC 100887)Imported
Taxonomic identifieri234621 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000002204 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi234621.RER_09720.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 168168Formyl_trans_NInterPro annotationAdd
BLAST
Domaini204 – 303100Formyl_trans_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4107S64. Bacteria.
COG0223. LUCA.
HOGENOMiHOG000261177.
KOiK00604.
OMAiFIIANYQ.
OrthoDBiEOG6B09WV.

Family and domain databases

Gene3Di3.10.25.10. 1 hit.
3.40.50.170. 1 hit.
InterProiIPR005793. Formyl_trans_C.
IPR002376. Formyl_transf_N.
IPR011034. Formyl_transferase_C-like.
[Graphical view]
PfamiPF02911. Formyl_trans_C. 1 hit.
PF00551. Formyl_trans_N. 1 hit.
[Graphical view]
SUPFAMiSSF50486. SSF50486. 1 hit.
SSF53328. SSF53328. 1 hit.

Sequencei

Sequence statusi: Complete.

C0ZRD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVATLGYQT WGHRTLQALI DSDHEVVLAI THPKSEHVYE QMWADSVADL
60 70 80 90 100
AAENGVPVHV ANKPDDAFKA ALAEAAPDII VANNWRTWLP AEVFDAPKYG
110 120 130 140 150
TLNIHDSLLP KYTGFSPLIW ALINGEEEVG LTAHLMDEEL DAGDIVLQRS
160 170 180 190 200
TTVGPTDTVT DLFHRTIDMI GPITLDALDL IASGRTDWTP QDRSQATFFH
210 220 230 240 250
KRAPQDSHVD WSWPAEVIER FVRAQSDPYP NAFAEFKGRR IRILKASVSR
260 270 280 290 300
GHYGGTPGRV FIQEDDGMVI VAGPDAWSGK NKGLRIERVR LDDGSEYTAA
310
EFFPHGGGYL T
Length:311
Mass (Da):34,484
Last modified:May 26, 2009 - v1
Checksum:iAAFB5A9CFDB95DB7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008957 Genomic DNA. Translation: BAH31680.1.
RefSeqiWP_020906323.1. NC_012490.1.

Genome annotation databases

EnsemblBacteriaiBAH31680; BAH31680; RER_09720.
GeneIDi7712883.
KEGGirer:RER_09720.
PATRICi23188250. VBIRhoEry66701_1428.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008957 Genomic DNA. Translation: BAH31680.1.
RefSeqiWP_020906323.1. NC_012490.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi234621.RER_09720.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAH31680; BAH31680; RER_09720.
GeneIDi7712883.
KEGGirer:RER_09720.
PATRICi23188250. VBIRhoEry66701_1428.

Phylogenomic databases

eggNOGiENOG4107S64. Bacteria.
COG0223. LUCA.
HOGENOMiHOG000261177.
KOiK00604.
OMAiFIIANYQ.
OrthoDBiEOG6B09WV.

Enzyme and pathway databases

BioCyciRERY234621:GHDE-989-MONOMER.

Family and domain databases

Gene3Di3.10.25.10. 1 hit.
3.40.50.170. 1 hit.
InterProiIPR005793. Formyl_trans_C.
IPR002376. Formyl_transf_N.
IPR011034. Formyl_transferase_C-like.
[Graphical view]
PfamiPF02911. Formyl_trans_C. 1 hit.
PF00551. Formyl_trans_N. 1 hit.
[Graphical view]
SUPFAMiSSF50486. SSF50486. 1 hit.
SSF53328. SSF53328. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
    Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PR4 / NBRC 100887Imported.
  2. "Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4."
    Sekine M., Tanikawa S., Omata S., Saito M., Fujisawa T., Tsukatani N., Tajima T., Sekigawa T., Kosugi H., Matsuo Y., Nishiko R., Imamura K., Ito M., Narita H., Tago S., Fujita N., Harayama S.
    Environ. Microbiol. 8:334-346(2006)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PR4 / NBRC 100887Imported.

Entry informationi

Entry nameiC0ZRD0_RHOE4
AccessioniPrimary (citable) accession number: C0ZRD0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: May 11, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.