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C0ZN46 (Y390_RHOE4) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0133 protein RER_03900
Gene names
Ordered Locus Names:RER_03900
OrganismRhodococcus erythropolis (strain PR4 / NBRC 100887) [Complete proteome] [HAMAP]
Taxonomic identifier234621 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Nocardiaceae › Rhodococcus

Protein attributes

Sequence length112 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subunit structure

Homodimer By similarity. HAMAP MF_00274

Sequence similarities

Belongs to the UPF0133 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 112112UPF0133 protein RER_03900 HAMAP MF_00274
PRO_1000204778

Sequences

Sequence LengthMass (Da)Tools
C0ZN46 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 7F13C489AF254D13

FASTA11211,218
        10         20         30         40         50         60 
MQPGGAPDMS ALLAQAQQMQ QQLMAAQQEM AQAEVTGQAG GGLVVATVKG TGEVVGLQID 

        70         80         90        100        110 
PKVVDPEDVE TLQDLVIGAI EDASRKAQEV AAEKLGPLAG GLGGGLPGLP GF

« Hide

References

[1]"Comparison of the complete genome sequences of Rhodococcus erythropolis PR4 and Rhodococcus opacus B4."
Takarada H., Sekine M., Hosoyama A., Yamada R., Fujisawa T., Omata S., Shimizu A., Tsukatani N., Tanikawa S., Fujita N., Harayama S.
Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PR4 / NBRC 100887.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008957 Genomic DNA. Translation: BAH31098.1.
RefSeqYP_002763837.1. NC_012490.1.

3D structure databases

ProteinModelPortalC0ZN46.
ModBaseSearch...

Protein-protein interaction databases

STRINGC0ZN46.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7714918.
GenomeReviewsGene locus RER_03900 in contig AP008957_GR.
KEGGrer:RER_03900.
PATRIC23187040. VBIRhoEry66701_0831.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAMADFLGM.
ProtClustDBPRK00153.

Family and domain databases

HAMAPMF_00274. UPF0133.
[Tree]
InterProIPR004401. UPF0133.
[Graphical view]
Gene3DG3DSA:3.30.1310.10. CHP103. 1 hit.
KOK09747.
PfamPF02575. DUF149. 1 hit.
[Graphical view]
PIRSFPIRSF004555. UCP004555. 1 hit.
SUPFAMSSF82607. CHP00103. 1 hit.
TIGRFAMsTIGR00103. DNA_YbaB_EbfC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY390_RHOE4
AccessionPrimary (citable) accession number: C0ZN46
Entry history
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: May 26, 2009
Last modified: January 25, 2012
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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