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Protein

Chaperonin 60 subunit beta 3, chloroplastic

Gene

CPN60B3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Involved in protein assisted folding.2 Publications

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Chaperone

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chaperonin 60 subunit beta 3, chloroplastic
Short name:
CPN-60 beta 3
Gene namesi
Name:CPN60B3
Synonyms:Cpn60-B(1)
Ordered Locus Names:At5g56500
ORF Names:MCD7.27
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G56500.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 2929ChloroplastSequence analysisAdd
BLAST
Chaini30 – 597568Chaperonin 60 subunit beta 3, chloroplasticPRO_0000413685Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei97 – 971PhosphoserineBy similarity
Modified residuei474 – 4741PhosphoserineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiC0Z361.
PRIDEiC0Z361.
ProMEXiC0Z361.

PTM databases

iPTMnetiC0Z361.

Expressioni

Inductioni

Up-regulated by light.1 Publication

Gene expression databases

GenevisibleiC0Z361. AT.

Interactioni

Subunit structurei

Part of the Cpn60 complex composed of 7 alpha and 7 beta subunits. Can also form a complex composed of 14 beta subunits only. Both complexes show ATPase activity. The Cpn60 complex interacts with the Cpn10 complex.2 Publications

Protein-protein interaction databases

BioGridi20995. 1 interaction.
STRINGi3702.AT5G56500.1.

Structurei

3D structure databases

ProteinModelPortaliC0Z361.
SMRiC0Z361. Positions 51-577.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili387 – 489103Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the chaperonin (HSP60) family.Curated

Keywords - Domaini

Coiled coil, Transit peptide

Phylogenomic databases

eggNOGiKOG0356. Eukaryota.
COG0459. LUCA.
HOGENOMiHOG000076290.
InParanoidiC0Z361.
KOiK04077.
OMAiPRICAMA.
OrthoDBiEOG093606CX.
PhylomeDBiC0Z361.

Family and domain databases

Gene3Di1.10.560.10. 2 hits.
3.50.7.10. 1 hit.
HAMAPiMF_00600. CH60. 1 hit.
InterProiIPR018370. Chaperonin_Cpn60_CS.
IPR001844. Chaprnin_Cpn60.
IPR002423. Cpn60/TCP-1.
IPR027409. GroEL-like_apical_dom.
IPR027413. GROEL-like_equatorial.
[Graphical view]
PfamiPF00118. Cpn60_TCP1. 1 hit.
[Graphical view]
PRINTSiPR00298. CHAPERONIN60.
SUPFAMiSSF52029. SSF52029. 1 hit.
TIGRFAMsiTIGR02348. GroEL. 1 hit.
PROSITEiPS00296. CHAPERONINS_CPN60. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0Z361-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASTFSATSS MGSSLAPPSN RLSSFVSISS SSFGRTQSIA QRKARFPKIY
60 70 80 90 100
AAKQLHFNKD GTAIKKLQAG VNKLADLVGV TLGPKGRNVV LESKYGSPRI
110 120 130 140 150
VNDGVTVARE VELEDPVENI GAKLVRQAAS KTNDLAGDGT TTSVVLAQGL
160 170 180 190 200
IAEGVKVVAA GANPVLITRG IEKTTKALVA ELKKMSKEVE DSELADVAAV
210 220 230 240 250
SAGNNYEVGN MIAEAMAKVG RKGVVTLEEG KSAENSLYVV EGMQFDRGYI
260 270 280 290 300
SPYFVTDSEK MCAEYENCKL FLVDKKITNA RDIISILEDA IKGGYPLLII
310 320 330 340 350
AEDIEQEPLA TLVVNKLRGT IKVAALKAPG FGERKSQYLD DIAALTGATV
360 370 380 390 400
IREEVGLQLE KVGPEVLGNA GKVVLTKDTT TIVGDGSTEE VVKKRVEQIK
410 420 430 440 450
NLIEAAEQDY EKEKLNERIA KLSGGVAVIQ VGAQTETELK EKKLRVEDAL
460 470 480 490 500
NATKAAVEEG IVVGGGCTLL RLASKVDAIK ETLANDEEKV GADIVKKALS
510 520 530 540 550
YPLKLIAKNA GVNGSVVSEK VLSSDNPKHG YNAATGKYED LMAAGIIDPT
560 570 580 590
KVVRCCLEHA SSVAKTFLMS DCVVVEIKEP ESAAPAGNPM DNSGYGF
Length:597
Mass (Da):63,325
Last modified:May 26, 2009 - v1
Checksum:i3B0BDFF3AFFA5F0E
GO

Sequence cautioni

The sequence BAB11583 differs from that shown. Reason: Erroneous gene model prediction. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti545 – 5451G → R in BAF00280 (Ref. 4) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB019234, AB009049 Genomic DNA. Translation: BAB11583.1. Sequence problems.
CP002688 Genomic DNA. Translation: AED96773.1.
CP002688 Genomic DNA. Translation: AED96774.1.
AK228340 mRNA. Translation: BAF00280.1.
AK319025 mRNA. Translation: BAH57140.1.
RefSeqiNP_001032083.1. NM_001037006.3.
NP_200461.4. NM_125033.4.
UniGeneiAt.43152.

Genome annotation databases

EnsemblPlantsiAT5G56500.1; AT5G56500.1; AT5G56500.
AT5G56500.2; AT5G56500.2; AT5G56500.
GeneIDi835751.
GrameneiAT5G56500.1; AT5G56500.1; AT5G56500.
AT5G56500.2; AT5G56500.2; AT5G56500.
KEGGiath:AT5G56500.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB019234, AB009049 Genomic DNA. Translation: BAB11583.1. Sequence problems.
CP002688 Genomic DNA. Translation: AED96773.1.
CP002688 Genomic DNA. Translation: AED96774.1.
AK228340 mRNA. Translation: BAF00280.1.
AK319025 mRNA. Translation: BAH57140.1.
RefSeqiNP_001032083.1. NM_001037006.3.
NP_200461.4. NM_125033.4.
UniGeneiAt.43152.

3D structure databases

ProteinModelPortaliC0Z361.
SMRiC0Z361. Positions 51-577.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi20995. 1 interaction.
STRINGi3702.AT5G56500.1.

PTM databases

iPTMnetiC0Z361.

Proteomic databases

PaxDbiC0Z361.
PRIDEiC0Z361.
ProMEXiC0Z361.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G56500.1; AT5G56500.1; AT5G56500.
AT5G56500.2; AT5G56500.2; AT5G56500.
GeneIDi835751.
GrameneiAT5G56500.1; AT5G56500.1; AT5G56500.
AT5G56500.2; AT5G56500.2; AT5G56500.
KEGGiath:AT5G56500.

Organism-specific databases

TAIRiAT5G56500.

Phylogenomic databases

eggNOGiKOG0356. Eukaryota.
COG0459. LUCA.
HOGENOMiHOG000076290.
InParanoidiC0Z361.
KOiK04077.
OMAiPRICAMA.
OrthoDBiEOG093606CX.
PhylomeDBiC0Z361.

Miscellaneous databases

PROiC0Z361.

Gene expression databases

GenevisibleiC0Z361. AT.

Family and domain databases

Gene3Di1.10.560.10. 2 hits.
3.50.7.10. 1 hit.
HAMAPiMF_00600. CH60. 1 hit.
InterProiIPR018370. Chaperonin_Cpn60_CS.
IPR001844. Chaprnin_Cpn60.
IPR002423. Cpn60/TCP-1.
IPR027409. GroEL-like_apical_dom.
IPR027413. GROEL-like_equatorial.
[Graphical view]
PfamiPF00118. Cpn60_TCP1. 1 hit.
[Graphical view]
PRINTSiPR00298. CHAPERONIN60.
SUPFAMiSSF52029. SSF52029. 1 hit.
TIGRFAMsiTIGR02348. GroEL. 1 hit.
PROSITEiPS00296. CHAPERONINS_CPN60. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCPNB3_ARATH
AccessioniPrimary (citable) accession number: C0Z361
Secondary accession number(s): Q0WRG9, Q9FHA9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 19, 2011
Last sequence update: May 26, 2009
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Miscellaneous

Assisted protein folding requires ATP hydrolysis, but not K+ ions.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.