C0WBB5 (C0WBB5_9FIRM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glucarate dehydratase EMBL EEH90397.1

Gene names

ORF Names:

ACDG_00756 EMBL EEH90397.1

Organism

Acidaminococcus sp. D21 EMBL EEH90397.1

Taxonomic identifier

563191 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Negativicutes › Selenomonadales › Acidaminococcaceae › Acidaminococcus

Protein attributes

Sequence length	442 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Ligand	Metal-binding SAAS SAAS013342
Technical term	3D-structure PDB 4HYR
Gene Ontology (GO)
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C0WBB5 [UniParc]. Last modified May 26, 2009. Version 1. Checksum: 2F7D89C2197047BA	FASTA	442	49,298
	10 20 30 40 50 60 MVPVITKMEV YPVAGHDSML LNLSGGHAPY FTRNIVILTD SEGNTGVGEV PGGPKITTAL 70 80 90 100 110 120 ENVSDIVVGT KVSDYRNTLL KVQAELDKSG EKDERGAQTF DLRTGVHVLT AIEAPCLDLL 130 140 150 160 170 180 GKALDMPVCR LLGAGQQRDF VRFLGYLFFV GDRKKTDLPY QSEEDSDCEW YRLRNEEAID 190 200 210 220 230 240 AEHVVALCKA AKNKYGFKDF KLKGGVLRGD EEMKVIKAMK KAFPDARMDL DPNGAWHLDD 250 260 270 280 290 300 AVRYVADMHG ILTYCEDPCG AEDGYSGREI MSEFRRRTGF PTATNMIATD WRQVGHSLES 310 320 330 340 350 360 QAVDIILADP HFWTMNGSVR VAQMCHEFGY TWGSHSNNHF DISLAMCVHV GAAVPGEYNA 370 380 390 400 410 420 LDTHWIWQEG RERLTKEPLK IANGGIKVPD KPGLGVEIDR DQVMKAHELY KKHCLGARND 430 440 AITMQYLIPG WKFDAKSPCL VR

References

[1]

"The Genome Sequence of Acidaminococcus sp. D21." The Broad Institute Genome Sequencing Platform Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C. , Jen D., Larson L., Lewis B., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Walk T., White J., Yandava C., Allen-Vercoe E., Strauss J., Ambrose C., Sibley C., White A., Lander E., Nusbaum C., Galagan J., Birren B. Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: D21 EMBL EEH90397.1.

[2]

"Structure of putative Glucarate dehydratase from Acidaminococcus sp. D21 with unusual static disorder." New York Structural Genomics Research Consortium (NYSGRC) Hegde R.P., Toro R., Burley S.K., Almo S.C., Ramagopal U.A. Submitted (NOV-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.84 ANGSTROMS) OF 2-442.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

ACGB01000010 Genomic DNA. Translation: EEH90397.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4HYR	X-ray	1.84	A/B	2-442	[»]

ProteinModelPortal

C0WBB5.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EEH90397; EEH90397; ACDG_00756.

PATRIC

24312062. VBIAciSp85863_0774.

Family and domain databases

InterPro

IPR013342. Mandelate_racemase_C.
IPR001354. MR_MLE.
[Graphical view]

PANTHER

PTHR13794. PTHR13794. 1 hit.

Pfam

PF01188. MR_MLE. 1 hit.
[Graphical view]

SMART

SM00922. MR_MLE. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

C0WBB5_9FIRM

Accession

Primary (citable) accession number: C0WBB5

Entry history

Integrated into UniProtKB/TrEMBL:	May 26, 2009
Last sequence update:	May 26, 2009
Last modified:	May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)