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C0WBB5

- C0WBB5_9FIRM

UniProt

C0WBB5 - C0WBB5_9FIRM

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Protein
Submitted name:

Putative glucarate dehydratase

Gene

ACDG_00756

Organism
Acidaminococcus sp. D21
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei364 – 3641ChlorideImported

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Metal-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative glucarate dehydrataseImported
Gene namesi
ORF Names:ACDG_00756Imported
OrganismiAcidaminococcus sp. D21Imported
Taxonomic identifieri563191 [NCBI]
Taxonomic lineageiBacteriaFirmicutesNegativicutesSelenomonadalesAcidaminococcaceaeAcidaminococcus

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4HYRX-ray1.84A/B2-442[»]
ProteinModelPortaliC0WBB5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di3.20.20.120. 2 hits.
3.30.390.10. 1 hit.
InterProiIPR029065. Enolase_C-like.
IPR029017. Enolase_N_like.
IPR013342. Mandelate_racemase_C.
IPR001354. MR/MLE/MAL.
[Graphical view]
PANTHERiPTHR13794. PTHR13794. 1 hit.
PfamiPF01188. MR_MLE. 1 hit.
[Graphical view]
SMARTiSM00922. MR_MLE. 1 hit.
[Graphical view]
SUPFAMiSSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.

Sequencei

Sequence statusi: Complete.

C0WBB5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVPVITKMEV YPVAGHDSML LNLSGGHAPY FTRNIVILTD SEGNTGVGEV
60 70 80 90 100
PGGPKITTAL ENVSDIVVGT KVSDYRNTLL KVQAELDKSG EKDERGAQTF
110 120 130 140 150
DLRTGVHVLT AIEAPCLDLL GKALDMPVCR LLGAGQQRDF VRFLGYLFFV
160 170 180 190 200
GDRKKTDLPY QSEEDSDCEW YRLRNEEAID AEHVVALCKA AKNKYGFKDF
210 220 230 240 250
KLKGGVLRGD EEMKVIKAMK KAFPDARMDL DPNGAWHLDD AVRYVADMHG
260 270 280 290 300
ILTYCEDPCG AEDGYSGREI MSEFRRRTGF PTATNMIATD WRQVGHSLES
310 320 330 340 350
QAVDIILADP HFWTMNGSVR VAQMCHEFGY TWGSHSNNHF DISLAMCVHV
360 370 380 390 400
GAAVPGEYNA LDTHWIWQEG RERLTKEPLK IANGGIKVPD KPGLGVEIDR
410 420 430 440
DQVMKAHELY KKHCLGARND AITMQYLIPG WKFDAKSPCL VR
Length:442
Mass (Da):49,298
Last modified:May 26, 2009 - v1
Checksum:i2F7D89C2197047BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACGB01000010 Genomic DNA. Translation: EEH90397.1.

Genome annotation databases

EnsemblBacteriaiEEH90397; EEH90397; ACDG_00756.
PATRICi24312062. VBIAciSp85863_0774.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACGB01000010 Genomic DNA. Translation: EEH90397.1 .

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4HYR X-ray 1.84 A/B 2-442 [» ]
ProteinModelPortali C0WBB5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai EEH90397 ; EEH90397 ; ACDG_00756 .
PATRICi 24312062. VBIAciSp85863_0774.

Family and domain databases

Gene3Di 3.20.20.120. 2 hits.
3.30.390.10. 1 hit.
InterProi IPR029065. Enolase_C-like.
IPR029017. Enolase_N_like.
IPR013342. Mandelate_racemase_C.
IPR001354. MR/MLE/MAL.
[Graphical view ]
PANTHERi PTHR13794. PTHR13794. 1 hit.
Pfami PF01188. MR_MLE. 1 hit.
[Graphical view ]
SMARTi SM00922. MR_MLE. 1 hit.
[Graphical view ]
SUPFAMi SSF51604. SSF51604. 1 hit.
SSF54826. SSF54826. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: D21Imported.
  2. "Structure of putative Glucarate dehydratase from Acidaminococcus sp. D21 with unusual static disorder."
    New York Structural Genomics Research Consortium (NYSGRC)
    Hegde R.P., Toro R., Burley S.K., Almo S.C., Ramagopal U.A.
    Submitted (NOV-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.84 ANGSTROMS) OF 2-442.

Entry informationi

Entry nameiC0WBB5_9FIRM
AccessioniPrimary (citable) accession number: C0WBB5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: October 29, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3