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C0WBB5 (C0WBB5_9FIRM) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:ACDG_00756 EMBL EEH90397.1
OrganismAcidaminococcus sp. D21 EMBL EEH90397.1
Taxonomic identifier563191 [NCBI]
Taxonomic lineageBacteriaFirmicutesNegativicutesSelenomonadalesAcidaminococcaceaeAcidaminococcus

Protein attributes

Sequence length442 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EEH90397.1

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Binding site3641Chloride PDB 4HYR

Sequences

Sequence LengthMass (Da)Tools
C0WBB5 [UniParc].

Last modified May 26, 2009. Version 1.
Checksum: 2F7D89C2197047BA

FASTA44249,298
        10         20         30         40         50         60 
MVPVITKMEV YPVAGHDSML LNLSGGHAPY FTRNIVILTD SEGNTGVGEV PGGPKITTAL 

        70         80         90        100        110        120 
ENVSDIVVGT KVSDYRNTLL KVQAELDKSG EKDERGAQTF DLRTGVHVLT AIEAPCLDLL 

       130        140        150        160        170        180 
GKALDMPVCR LLGAGQQRDF VRFLGYLFFV GDRKKTDLPY QSEEDSDCEW YRLRNEEAID 

       190        200        210        220        230        240 
AEHVVALCKA AKNKYGFKDF KLKGGVLRGD EEMKVIKAMK KAFPDARMDL DPNGAWHLDD 

       250        260        270        280        290        300 
AVRYVADMHG ILTYCEDPCG AEDGYSGREI MSEFRRRTGF PTATNMIATD WRQVGHSLES 

       310        320        330        340        350        360 
QAVDIILADP HFWTMNGSVR VAQMCHEFGY TWGSHSNNHF DISLAMCVHV GAAVPGEYNA 

       370        380        390        400        410        420 
LDTHWIWQEG RERLTKEPLK IANGGIKVPD KPGLGVEIDR DQVMKAHELY KKHCLGARND 

       430        440 
AITMQYLIPG WKFDAKSPCL VR 

« Hide

References

[1]"The Genome Sequence of Acidaminococcus sp. D21."
The Broad Institute Genome Sequencing Platform
Ward D., Young S.K., Kodira C.D., Zeng Q., Koehrsen M., Alvarado L., Berlin A., Borenstein D., Chen Z., Engels R., Freedman E., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Hepburn T., Howarth C. expand/collapse author list , Jen D., Larson L., Lewis B., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Walk T., White J., Yandava C., Allen-Vercoe E., Strauss J., Ambrose C., Sibley C., White A., Lander E., Nusbaum C., Galagan J., Birren B.
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: D21 EMBL EEH90397.1.
[2]"Structure of putative Glucarate dehydratase from Acidaminococcus sp. D21 with unusual static disorder."
New York Structural Genomics Research Consortium (NYSGRC)
Hegde R.P., Toro R., Burley S.K., Almo S.C., Ramagopal U.A.
Submitted (NOV-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.84 ANGSTROMS) OF 2-442 IN COMPLEX WITH CHLORIDE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ACGB01000010 Genomic DNA. Translation: EEH90397.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4HYRX-ray1.84A/B2-442[»]
ProteinModelPortalC0WBB5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEEH90397; EEH90397; ACDG_00756.
PATRIC24312062. VBIAciSp85863_0774.

Family and domain databases

InterProIPR013342. Mandelate_racemase_C.
IPR001354. MR_MLE.
[Graphical view]
PANTHERPTHR13794. PTHR13794. 1 hit.
PfamPF01188. MR_MLE. 1 hit.
[Graphical view]
SMARTSM00922. MR_MLE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC0WBB5_9FIRM
AccessionPrimary (citable) accession number: C0WBB5
Entry history
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: December 11, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)