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Protein

Clathrin light chain

Gene

clc

Organism
Equus caballus (Horse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Clathrin light chainUniRule annotation
Gene namesi
Name:clcImported
OrganismiEquus caballus (Horse)Imported
Taxonomic identifieri9796 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaPerissodactylaEquidaeEquus

Subcellular locationi

  • Membranecoated pit UniRule annotation; Peripheral membrane protein UniRule annotation; Cytoplasmic side UniRule annotation
  • Cytoplasmic vesicle membrane UniRule annotation; Peripheral membrane protein UniRule annotation; Cytoplasmic side UniRule annotation

  • Note: Cytoplasmic face of coated pits and vesicles.UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Coated pitUniRule annotation, Cytoplasmic vesicleUniRule annotation, Membrane

PTM / Processingi

Proteomic databases

PeptideAtlasiC0SW05.

Structurei

3D structure databases

SMRiC0SW05.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the clathrin light chain family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000008147.
KOiK04644.

Family and domain databases

InterProiView protein in InterPro
IPR000996. Clathrin_L-chain.
PANTHERiPTHR10639. PTHR10639. 1 hit.
PfamiView protein in Pfam
PF01086. Clathrin_lg_ch. 1 hit.
PROSITEiView protein in PROSITE
PS00224. CLATHRIN_LIGHT_CHN_1. 1 hit.
PS00581. CLATHRIN_LIGHT_CHN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

C0SW05-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAELDPFGVP AGGPALGNGV AGEEDPAAAF LAQQESEIAG IENDEAFAIL
60 70 80 90 100
DGGAPGSQPH GEPPGIPDAV DGVTNGDYYQ ESNGPTDSYA AISQVDRLQS
110 120 130 140 150
EPESIRKWRE EQTERLEALD ANSRKQEAEW KEKAIKELDE WYARQDEQLQ
160 170 180 190 200
KTKANNRAAE EAFVNDIEES SPGTEWERVA RLCDFNPKSS KQAKDVSRMR
210
SVLISLKQAP LVH
Length:213
Mass (Da):23,308
Last modified:May 26, 2009 - v1
Checksum:iFCF2754AC7B684DE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB495091 mRNA. Translation: BAH56384.1.
RefSeqiNP_001152806.1. NM_001159334.1.
UniGeneiEca.16911.

Genome annotation databases

GeneIDi100055375.
KEGGiecb:100055375.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiC0SW05_HORSE
AccessioniPrimary (citable) accession number: C0SW05
Entry historyiIntegrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: June 7, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)