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Protein
Submitted name:

Putative uncharacterized protein At5g04940

Gene

At5g04940

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone].SAAS annotation

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseUniRule annotationSAAS annotation, Transferase

Keywords - Ligandi

S-adenosyl-L-methionineSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized protein At5g04940Imported
Gene namesi
Ordered Locus Names:At5g04940Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Organism-specific databases

TAIRiAT5G04940.

Subcellular locationi

Nucleus UniRule annotation

GO - Cellular componenti

  1. chromosome Source: UniProtKB-KW
  2. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PRIDEiC0SVN4.

Expressioni

Gene expression databases

GenevestigatoriC0SVN4.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G04940.1-P.

Structurei

3D structure databases

ProteinModelPortaliC0SVN4.
SMRiC0SVN4. Positions 149-666.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation
Contains 1 post-SET domain.UniRule annotation
Contains 1 pre-SET domain.UniRule annotation
Contains SET domain.SAAS annotation
Contains pre-SET domain.SAAS annotation

Phylogenomic databases

KOiK11420.
OMAiHECGPTC.
PhylomeDBiC0SVN4.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C0SVN4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS
60 70 80 90 100
SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
110 120 130 140 150
TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR
160 170 180 190 200
ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
210 220 230 240 250
GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET
260 270 280 290 300
EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
310 320 330 340 350
ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT
360 370 380 390 400
FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
410 420 430 440 450
VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI
460 470 480 490 500
RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
510 520 530 540 550
KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV
560 570 580 590 600
YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
610 620 630 640 650
PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN
660 670
PLYGKRKCFC GSAYCRGSFG
Length:670
Mass (Da):74,471
Last modified:May 26, 2009 - v1
Checksum:iC92CE89FF5C630F1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei670 – 6701Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB493737 mRNA. Translation: BAH30575.1.
RefSeqiNP_196113.1. NM_120576.1.
NP_850767.1. NM_180436.1.
UniGeneiAt.8375.

Genome annotation databases

GeneIDi830376.
KEGGiath:AT5G04940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB493737 mRNA. Translation: BAH30575.1.
RefSeqiNP_196113.1. NM_120576.1.
NP_850767.1. NM_180436.1.
UniGeneiAt.8375.

3D structure databases

ProteinModelPortaliC0SVN4.
SMRiC0SVN4. Positions 149-666.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G04940.1-P.

Proteomic databases

PRIDEiC0SVN4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi830376.
KEGGiath:AT5G04940.

Organism-specific databases

TAIRiAT5G04940.

Phylogenomic databases

KOiK11420.
OMAiHECGPTC.
PhylomeDBiC0SVN4.

Gene expression databases

GenevestigatoriC0SVN4.

Family and domain databases

Gene3Di2.30.280.10. 1 hit.
InterProiIPR025794. Hist-Lys_N-MeTrfase_plant.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR015947. PUA-like_domain.
IPR001214. SET_dom.
IPR003105. SRA_YDG.
[Graphical view]
PfamiPF05033. Pre-SET. 1 hit.
PF02182. SAD_SRA. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
SM00466. SRA. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
PROSITEiPS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51575. SAM_MT43_SUVAR39_2. 1 hit.
PS50280. SET. 1 hit.
PS51015. YDG. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "ORF Cloning and Analysis of Arabidopsis Transcription Factor Genes."
    Fujita M.
    Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiC0SVN4_ARATH
AccessioniPrimary (citable) accession number: C0SVN4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 26, 2009
Last sequence update: May 26, 2009
Last modified: January 7, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.