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C0SP89 (YOAH_BACSU) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative methyl-accepting chemotaxis protein YoaH
Gene names
Name:yoaH
Ordered Locus Names:BSU18610
OrganismBacillus subtilis (strain 168) [Reference proteome] [HAMAP]
Taxonomic identifier224308 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length561 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Induction

Transcriptionally regulated by sigma-D factor. Ref.3

Sequence similarities

Contains 1 HAMP domain.

Contains 1 methyl-accepting transducer domain.

Sequence caution

The sequence AAB84447.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Molecular functionTransducer
   PTMMethylation
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 561561Putative methyl-accepting chemotaxis protein YoaH
PRO_0000387464

Regions

Transmembrane7 – 2721Helical; Potential
Transmembrane181 – 20121Helical; Potential
Domain202 – 25655HAMP
Domain275 – 511237Methyl-accepting transducer
Compositional bias259 – 33476Ser-rich

Amino acid modifications

Modified residue2711Glutamate methyl ester (Glu) By similarity
Modified residue4941Glutamate methyl ester (Gln) By similarity
Modified residue4951Glutamate methyl ester (Gln) By similarity
Modified residue5301Glutamate methyl ester (Glu) By similarity
Modified residue5371Glutamate methyl ester (Glu) By similarity

Sequences

Sequence LengthMass (Da)Tools
C0SP89 [UniParc].

Last modified May 5, 2009. Version 1.
Checksum: DBAF969970871179

FASTA56161,004
        10         20         30         40         50         60 
MKVKTKLLGI ISILVVSIIG IGGSSVFMIS STVKKNEELK DKMEFQKEIK HIQYELTGLS 

        70         80         90        100        110        120 
NDERGFLITR DKEYDEGMKG KADDVLKSLD RVNDLIDEEK YQSNIEDIKT SFTQYRALNQ 

       130        140        150        160        170        180 
QVVTAYSSNP KKAETIHFGE ERTIRKEGVA PAVNKLSDRL DQEVEDLKDE IQGNGKMSQS 

       190        200        210        220        230        240 
LIIIVTGISV ILGIVLSIML LKSIMVPLRS INKQLEEIAH GEADLTKKVI VKNKDEFGQL 

       250        260        270        280        290        300 
AQSFNSFTHS LTQIVKQISS SSEQVAASSE ELSASAEESK STSEHISRAM QMAADSNVKQ 

       310        320        330        340        350        360 
SSMTEKSAES ITELLDSISS VASNTGNIAD LSSSMRDKAE IGSKSVNKML DQMKFIDKSV 

       370        380        390        400        410        420 
DSAGNGLQTL VASTAEISDI SSLITTISEQ TNLLALNAAI EAARAGEQGK GFAVVAEEVR 

       430        440        450        460        470        480 
KLADETNKSA NHIQSVVATI QNESIETVNN IKVVQENVSS GIVLSQETTG NFNEILNLVE 

       490        500        510        520        530        540 
QVTSQIQEVA AATQQLTSGV EVIQHTVHTL AAGTKETSAN TEAVANSSQE QLHSMGEISY 

       550        560 
AAESLSQLAE ELQTVINRFK Y 

« Hide

References

« Hide 'large scale' references
[1]"Sequence analysis of the Bacillus subtilis chromosome region between the terC and odhAB loci cloned in a yeast artificial chromosome."
Lapidus A., Galleron N., Sorokin A., Ehrlich S.D.
Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"The complete genome sequence of the Gram-positive bacterium Bacillus subtilis."
Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V., Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R., Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S., Bruschi C.V. expand/collapse author list , Caldwell B., Capuano V., Carter N.M., Choi S.-K., Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F., Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D., Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M., Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P., Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K., Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S., Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y., Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G., Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J., Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C., Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S., Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B., Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S., Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M., Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y., Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J., Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A., Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M., Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S., Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E., Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K., Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E., Yoshikawa H., Danchin A.
Nature 390:249-256(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 168.
[3]"Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses."
Serizawa M., Yamamoto H., Yamaguchi H., Fujita Y., Kobayashi K., Ogasawara N., Sekiguchi J.
Gene 329:125-136(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: INDUCTION BY SIGMA-D.
Strain: 168.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF027868 Genomic DNA. Translation: AAB84447.1. Different initiation.
AL009126 Genomic DNA. Translation: CAB13753.2.
PIRB69896.
RefSeqNP_389742.2. NC_000964.3.

3D structure databases

ProteinModelPortalC0SP89.
SMRC0SP89. Positions 202-256, 276-560.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING224308.BSU18610.

Proteomic databases

PaxDbC0SP89.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAB13753; CAB13753; BSU18610.
GeneID940110.
KEGGbsu:BSU18610.
PATRIC18975563. VBIBacSub10457_1972.

Organism-specific databases

GenoListBSU18610.

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000097066.
OrthoDBEOG67X1NZ.
ProtClustDBCLSK237207.

Enzyme and pathway databases

BioCycBSUB:BSU18610-MONOMER.

Family and domain databases

InterProIPR024478. 4HB_MCP.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
[Graphical view]
PfamPF12729. 4HB_MCP_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYOAH_BACSU
AccessionPrimary (citable) accession number: C0SP89
Secondary accession number(s): O34576, Q796F8
Entry history
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: May 5, 2009
Last modified: February 19, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Bacillus subtilis

Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList