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C0QUJ4 (C0QUJ4_PERMH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254
Gene names
Name:glyQ HAMAP MF_00254 EMBL ACO04130.1
Ordered Locus Names:PERMA_0570
OrganismPersephonella marina (strain DSM 14350 / EX-H1) [Complete proteome] [HAMAP]
Taxonomic identifier123214 [NCBI]
Taxonomic lineageBacteria › Aquificae › Aquificales › Hydrogenothermaceae › Persephonella

Protein attributes

Sequence length301 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254 SAAS SAAS002310

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254 SAAS SAAS002310

Subcellular location

Cytoplasm By similarity HAMAP MF_00254.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Sequences

Sequence LengthMass (Da)Tools
C0QUJ4 [UniParc].

Last modified May 5, 2009. Version 1.
Checksum: 38914819E9288500

FASTA30135,180
        10         20         30         40         50         60 
MTDNKNFLTF QEIIQRLQKF WTDKGCILWQ PYDIEVGAGT MNPATFLRTL GPEEWNVCYV 

        70         80         90        100        110        120 
EPSRRPKDGR YGENPNRLQH YYQFQVILKP SPENPQELYL QSLEALGIDL SQHDIRFVED 

       130        140        150        160        170        180 
DWESPTLGAW GLGWEVWLDG MEITQFTYFQ QVGSLDLPVI SVEITYGLER IATYLQGVDS 

       190        200        210        220        230        240 
VYDIVWAEGL TYGDIYRESE RQWSVYNFEE ADTDMLFKTF DMYEKEGFKL IQKNLPIPAY 

       250        260        270        280        290        300 
DYALKCSHIF NLLDARGALS VNERARFIGR VRDLARECAK GFVKHREELG FPMIKKKKVE 


A

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References

[1]"Complete and draft genome sequences of six members of the Aquificales."
Reysenbach A.-L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A.
J. Bacteriol. 191:1992-1993(2009) [PubMed: 19136599] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001230 Genomic DNA. Translation: ACO04130.1.
RefSeqYP_002730359.1. NC_012440.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC0QUJ4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7674624.
GenomeReviewsGene locus PERMA_0570 in contig CP001230_GR.
KEGGpmx:PERMA_0570.
PATRIC22914607. VBIPerMar119911_0613.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMACRRPTDG.
ProtClustDBPRK09348.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
KOK01878.
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. GlyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC0QUJ4_PERMH
AccessionPrimary (citable) accession number: C0QUJ4
Entry history
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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