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Protein
Submitted name:

Putative ribulose bisphosphate carboxylase (RuBisCO)

Gene

PERMA_0408

Organism
Persephonella marina (strain DSM 14350 / EX-H1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPMAR123214:GIZP-407-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ribulose bisphosphate carboxylase (RuBisCO)Imported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:PERMA_0408Imported
OrganismiPersephonella marina (strain DSM 14350 / EX-H1)Imported
Taxonomic identifieri123214 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesHydrogenothermaceaePersephonella
ProteomesiUP000001366 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi123214.PERMA_0408.

Structurei

3D structure databases

ProteinModelPortaliC0QU33.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
KOiK08965.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.

Sequencei

Sequence statusi: Complete.

C0QU33-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNFIEATYIL RSKKDKGPDY INRFLESISI FNGKNLTDKK YLPQLVETDI
60 70 80 90 100
FYDESRKIYE YIFKIGFPIV LFEHNISSII SILRKVTAHS GEDEIVIVNI
110 120 130 140 150
DIPSCYTDHF SGPKYGTDRI KRILEIEHEP VIAGHIFPFV GVGPEVYVDL
160 170 180 190 200
FEKLAVNGVD IVIEDTSFID DRLIPFDKRV ELCLKKAEQI EKDTGRKIIY
210 220 230 240 250
IPVLTGSVGE VFEKARFAES IGIHGFHIDI DPYGMEFLRS LSDGTEGILA
260 270 280 290 300
VSGSVFSNRY LEGQVFVKLL RLSGADILNI PSPFNENRYT LSRVYELIRE
310 320 330 340 350
ATDRWENIKP VFPMLSGYTK PSDIPDIYRE FGNQVIINIE ESYYNHPEGL
360 370 380 390
QAGVRAFREA LDCVIKGISL DECRKKSRDL DLALSKWGSH
Length:390
Mass (Da):44,554
Last modified:May 5, 2009 - v1
Checksum:i6B2A1B73FE178657
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001230 Genomic DNA. Translation: ACO03842.1.
RefSeqiYP_002730198.1. NC_012440.1.

Genome annotation databases

EnsemblBacteriaiACO03842; ACO03842; PERMA_0408.
KEGGipmx:PERMA_0408.
PATRICi22914291. VBIPerMar119911_0456.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001230 Genomic DNA. Translation: ACO03842.1.
RefSeqiYP_002730198.1. NC_012440.1.

3D structure databases

ProteinModelPortaliC0QU33.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi123214.PERMA_0408.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACO03842; ACO03842; PERMA_0408.
KEGGipmx:PERMA_0408.
PATRICi22914291. VBIPerMar119911_0456.

Phylogenomic databases

eggNOGiCOG1850.
KOiK08965.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciPMAR123214:GIZP-407-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14350 / EX-H1Imported.

Entry informationi

Entry nameiC0QU33_PERMH
AccessioniPrimary (citable) accession number: C0QU33
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: April 1, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.