C0QQD5 (C0QQD5_PERMH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine--tRNA ligase EMBL ACO04898.1

Gene names

Ordered Locus Names:

PERMA_1095

Organism

Persephonella marina (strain DSM 14350 / EX-H1) [Complete proteome] [HAMAP]

Taxonomic identifier

123214 [NCBI]

Taxonomic lineage

Bacteria › Aquificae › Aquificales › Hydrogenothermaceae › Persephonella

Protein attributes

Sequence length	309 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C0QQD5 [UniParc]. Last modified May 5, 2009. Version 1. Checksum: F9E62FDE1A650A92	FASTA	309	36,984
	10 20 30 40 50 60 MFYLEKSKIL KGIRDYFERT GAIEVFTDIL RLYPNLDAHI LPVELFFNDN EGRKRGFLHT 70 80 90 100 110 120 SPEYEMKRIL SEIKRDIYQI TKVFRNFESS KKHKIEFTML EWYRVGYNLD DIMDDTQNIF 130 140 150 160 170 180 IESAISLYKK PVVTYMGKRY DLRESEKITV DEAFYRFTSV YPDRYEDMIR FLKEKEDIKE 190 200 210 220 230 240 EIDYEEAFFR IYAFYVEPNL GKEKLTFIYN YPTAFASLSK IENNRGKRFE AYINGLELVN 250 260 270 280 290 300 GYHELTDPEK VKNILEREAL RKKEETGKDY PVDYRFIEIT EDLPDCSGAS LGIDRLFMVL LNKSNIKDI

References

[1]

"Complete and draft genome sequences of six members of the Aquificales." Reysenbach A.-L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A. J. Bacteriol. 191:1992-1993(2009) [PubMed: 19136599] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001230 Genomic DNA. Translation: ACO04898.1.
RefSeq	YP_002730881.1. NC_012440.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C0QQD5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7675391.
GenomeReviews	Gene locus PERMA_1095 in contig CP001230_GR.
KEGG	pmx:PERMA_1095.
PATRIC	22915653. VBIPerMar119911_1133.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	MPEASGI.
ProtClustDB	PRK09350.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C0QQD5_PERMH

Accession

Primary (citable) accession number: C0QQD5

Entry history

Integrated into UniProtKB/TrEMBL:	May 5, 2009
Last sequence update:	May 5, 2009
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)