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C0QPX6 (C0QPX6_PERMH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Indole-3-glycerol phosphate synthase HAMAP MF_00134
Short name=IGPS HAMAP MF_00134
EC=4.1.1.48 HAMAP MF_00134
Gene names
Name:trpC HAMAP MF_00134 EMBL ACO04707.1
Ordered Locus Names:PERMA_0936
OrganismPersephonella marina (strain DSM 14350 / EX-H1) [Complete proteome] [HAMAP]
Taxonomic identifier123214 [NCBI]
Taxonomic lineageBacteria › Aquificae › Aquificales › Hydrogenothermaceae › Persephonella

Protein attributes

Sequence length263 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-C-(3-indolyl)-glycerol 3-phosphate + CO2 + H2O. HAMAP MF_00134 SAAS SAAS013798

Pathway

Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 4/5. HAMAP MF_00134 SAAS SAAS013798

Sequence similarities

Belongs to the TrpC family. HAMAP MF_00134

Sequences

Sequence LengthMass (Da)Tools
C0QPX6 [UniParc].

Last modified May 5, 2009. Version 1.
Checksum: 672BA1345C443C3C

FASTA26329,767
        10         20         30         40         50         60 
MDILDRIILT KKRELENYSK EYLDLIDIKI SKRKHPVIDF RSAFKKGRIN IIAEVKKASP 

        70         80         90        100        110        120 
SKGVIREDFD PVKIAKIYEE NGAAAISVLT DKEYFKGDIQ YIEQIKESGI NIPVLRKDFI 

       130        140        150        160        170        180 
IDKRQIDEAF AFGSDTFLLI ARVLENEELE DLINYGRSFG MEPLIEVHTK EECEKAVSSG 

       190        200        210        220        230        240 
GKIIGINNRD LKTFKVDINL SKELAPYLKE LGADIVIAES GISTHDQIVE LLGYGVDGFL 

       250        260 
IGESLMREED IGKKLRKLLG DTT

« Hide

References

[1]"Complete and draft genome sequences of six members of the Aquificales."
Reysenbach A.-L., Hamamura N., Podar M., Griffiths E., Ferreira S., Hochstein R., Heidelberg J., Johnson J., Mead D., Pohorille A., Sarmiento M., Schweighofer K., Seshadri R., Voytek M.A.
J. Bacteriol. 191:1992-1993(2009) [PubMed: 19136599] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001230 Genomic DNA. Translation: ACO04707.1.
RefSeqYP_002730722.1. NC_012440.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC0QPX6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7675702.
GenomeReviewsGene locus PERMA_0936 in contig CP001230_GR.
KEGGpmx:PERMA_0936.
PATRIC22915337. VBIPerMar119911_0976.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAFETDINT.
ProtClustDBPRK00278.

Family and domain databases

HAMAPMF_00134_A. IGPS_A.
[Tree]
MF_00134_B. IGPS_B.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR013798. Indole-3-glycerol_P_synth.
IPR001468. Indole-3-GlycerolPSynthase_CS.
IPR011060. RibuloseP-bd_barrel.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01609.
PfamPF00218. IGPS. 1 hit.
[Graphical view]
SUPFAMSSF51366. RibP_bind_barrel. 1 hit.
PROSITEPS00614. IGPS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC0QPX6_PERMH
AccessionPrimary (citable) accession number: C0QPX6
Entry history
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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