Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

GabT

Gene

gabT

Organism
Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. (S)-3-amino-2-methylpropionate transaminase activity Source: UniProtKB-EC
  2. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  3. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciDAUT177437:GHLR-3874-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
GabTImported (EC:2.6.1.19Imported, EC:2.6.1.22Imported)
Gene namesi
Name:gabTImported
Ordered Locus Names:HRM2_38760Imported
OrganismiDesulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)Imported
Taxonomic identifieri177437 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfobacterium
ProteomesiUP000000442: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi177437.HRM2_38760.

Structurei

3D structure databases

ProteinModelPortaliC0QBD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiDIFEEEH.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C0QBD2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTENRSDYYQ KLRNKNVPQG PANITPAYIA KASGATMTDL EGKEYIDFAG
60 70 80 90 100
GIGVNNVGHA HPKVVAAIKD QADKFIHTCF HVGMYESYVD LAAKLNELVP
110 120 130 140 150
GDFPKMTMFA NAGAEAVENA VKIARYATKR PAVIAMENGF HGRTLLTMSL
160 170 180 190 200
TSKVKPYKFG FGPFAPEVYR IPYAYCYRCP FGLKYPNCGV ACADYLEDFF
210 220 230 240 250
ISNVAAESTA AIIAEPIQGE GGFVTPPPEY FPKLAAICKK YGIALIIDEV
260 270 280 290 300
QSGAGRTGKF LAIEHWNVEP DIVTMAKSLG GGMPLSAITG RKEFMEAPHI
310 320 330 340 350
GGLGGTYSGN PISCAAALAV LEILFEDKLL ERSRELGEIL QKRFSDLQSK
360 370 380 390 400
FEIIGEVRGK GPMLGMELVK DRETKEPATE LTKKLTQICF DKGLILLSCG
410 420 430
NFGNVIRTLM PFVITDAQLD KGLSILEESL HELTK
Length:435
Mass (Da):47,449
Last modified:May 5, 2009 - v1
Checksum:i0DF273EA4F6D3A9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001087 Genomic DNA. Translation: ACN16934.1.
RefSeqiYP_002605098.1. NC_012108.1.

Genome annotation databases

EnsemblBacteriaiACN16934; ACN16934; HRM2_38760.
GeneIDi7498956.
KEGGidat:HRM2_38760.
PATRICi21687527. VBIDesAut25181_3991.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001087 Genomic DNA. Translation: ACN16934.1.
RefSeqiYP_002605098.1. NC_012108.1.

3D structure databases

ProteinModelPortaliC0QBD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177437.HRM2_38760.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACN16934; ACN16934; HRM2_38760.
GeneIDi7498956.
KEGGidat:HRM2_38760.
PATRICi21687527. VBIDesAut25181_3991.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiDIFEEEH.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciDAUT177437:GHLR-3874-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43914 / DSM 3382 / HRM2Imported.

Entry informationi

Entry nameiC0QBD2_DESAH
AccessioniPrimary (citable) accession number: C0QBD2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: January 7, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.