C0QAM8 (C0QAM8_DESAH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyridoxal-dependent decarboxylase family protein EMBL ACN16811.1
EC=4.1.1.15 EMBL ACN16811.1

Gene names

Ordered Locus Names:

HRM2_37530

Organism

Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) [Complete proteome] [HAMAP] EMBL ACN16811.1

Taxonomic identifier

177437 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfobacterales › Desulfobacteraceae › Desulfobacterium › Desulfobacterium autotrophicum

Protein attributes

Sequence length	554 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ACN16811.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C0QAM8 [UniParc]. Last modified May 5, 2009. Version 1. Checksum: E63F4F0E8E8C1641	FASTA	554	61,424
	10 20 30 40 50 60 MTVTHNSKKV GQMNSNDRKN PSLIADWKTL ERIFIRPEDE ACRKTLVKYM EQILFGLHDF 70 80 90 100 110 120 LNSNVGVTQE ISLLELTNLY RDTLISPDPE KKLENVISDI IHKIAPRAVN VASPYFVGHM 130 140 150 160 170 180 TAAIPFFMVH LKTIVAALNQ NVIKLETSKV LSVIEKQVLA KIHRLIYRRD EAFYQTHVQS 190 200 210 220 230 240 VDTSLGAFTT GGTTANLMAM WVARNHFLGA GVEQQGMAAA MQAKGVERAV ILVSKRGHYS 250 260 270 280 290 300 LKKAGGILGL GNSNVLAMDV DQHQRMDMKK LEVTIRNLKK DGKTGIIAVV GIAGATETGT 310 320 330 340 350 360 VDPLGEMADL CLGQGIHFHV DAAWGGPVLL SERYAPLLKG IERADSVSMD GHKQFYMPMT 370 380 390 400 410 420 SGMVYFRDPG AMDQIAYYSN YVNREGSVDL GIKSLEGSRE ANALILDSSL KIMGSRGYAL 430 440 450 460 470 480 MIDHGIETAK AFAAEIEQRV MFEVVTPPEL NILTYRMVPP DVCRRLEHAD PKGREILNGY 490 500 510 520 530 540 LDELNIYIQR TQREAGKSFV SRTRICPVPG SEGGRVVLRS VIMNPMTTNA VLREILDEQE 550 RIGQGFCDPI PQIL

References

[1]

"Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide." Strittmatter A.W., Liesegang H., Rabus R., Decker I., Amann J., Andres S., Henne A., Fricke W.F., Martinez-Arias R., Bartels D., Goesmann A., Krause L., Puehler A., Klenk H.P., Richter M., Schuler M., Gloeckner F.O., Meyerdierks A., Gottschalk G., Amann R. Environ. Microbiol. 11:1038-1055(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43914 / DSM 3382 / HRM2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001087 Genomic DNA. Translation: ACN16811.1.
RefSeq	YP_002604975.1. NC_012108.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	177437.HRM2_37530.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACN16811; ACN16811; HRM2_37530.
GeneID	7502488.
KEGG	dat:HRM2_37530.
PATRIC	21687253. VBIDesAut25181_3854.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000282553.
KO	K01580.
OMA	CHFHVDA.
ProtClustDB	CLSK874231.
Enzyme and pathway databases
BioCyc	DAUT177437:GHLR-3826-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C0QAM8_DESAH

Accession

Primary (citable) accession number: C0QAM8

Entry history

Integrated into UniProtKB/TrEMBL:	May 5, 2009
Last sequence update:	May 5, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)