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C0Q8U5

- C0Q8U5_DESAH

UniProt

C0Q8U5 - C0Q8U5_DESAH

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Protein
Submitted name: DdlB2
Gene
ddlB2, HRM2_13240
Organism
Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Cell wall formation By similarity.SAAS annotations

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotations

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.SAAS annotations

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
  3. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

  1. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
  2. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotationsImported

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradationSAAS annotations, Peptidoglycan synthesisSAAS annotations

Keywords - Ligandi

ATP-bindingSAAS annotations, MagnesiumSAAS annotations, ManganeseSAAS annotations, Metal-bindingSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciDAUT177437:GHLR-1324-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Submitted name:
DdlB2Imported (EC:6.3.2.4Imported)
Gene namesi
Name:ddlB2Imported
Ordered Locus Names:HRM2_13240Imported
OrganismiDesulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)Imported
Taxonomic identifieri177437 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfobacterium
ProteomesiUP000000442: Chromosome

Subcellular locationi

Cytoplasm By similarity SAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi177437.HRM2_13240.

Structurei

3D structure databases

ProteinModelPortaliC0Q8U5.

Family & Domainsi

Sequence similaritiesi

Contains ATP-grasp domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG1181.
HOGENOMiHOG000011592.
KOiK01921.
OMAiEMAGVPC.
OrthoDBiEOG66MQKK.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
SUPFAMiSSF52440. SSF52440. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C0Q8U5-1 [UniParc]FASTAAdd to Basket

« Hide

MIIGITYDLR QDYLDMGYTE LETAEFDSVE TIEAIETTLQ GLGHETRRIG    50
NAIRLTERLV QGERWDLVFN IAEGLHGIGR EAQIPAILDL YNIPYTFSDP 100
MVMAVTLHKG MTKHIIRDAG LATADFKVAN SARDAWNLPF DPPFFVKPVA 150
EGTGMGITAK SLVKNALDLP GVCQELVEQF HQPVLIEEFL TGREFTVGIV 200
GTGTRAQVMG TMEIIVISSK KDEVYSFENK EGWKSKVQYL PLSPGTDPLI 250
QAVEDLALSA WKVLGCRDGG RIDIRCDAAG RPSFIEVNPL AGLRPEYSDL 300
PIVCQFFGTS YVQLIELILE SAMERVPVLE TA 332
Length:332
Mass (Da):36,753
Last modified:May 5, 2009 - v1
Checksum:iEDC71F94E221DA6A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001087 Genomic DNA. Translation: ACN14435.1.
RefSeqiYP_002602599.1. NC_012108.1.

Genome annotation databases

EnsemblBacteriaiACN14435; ACN14435; HRM2_13240.
GeneIDi7501247.
KEGGidat:HRM2_13240.
PATRICi21682289. VBIDesAut25181_1424.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001087 Genomic DNA. Translation: ACN14435.1 .
RefSeqi YP_002602599.1. NC_012108.1.

3D structure databases

ProteinModelPortali C0Q8U5.
ModBasei Search...

Protein-protein interaction databases

STRINGi 177437.HRM2_13240.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACN14435 ; ACN14435 ; HRM2_13240 .
GeneIDi 7501247.
KEGGi dat:HRM2_13240.
PATRICi 21682289. VBIDesAut25181_1424.

Phylogenomic databases

eggNOGi COG1181.
HOGENOMi HOG000011592.
KOi K01921.
OMAi EMAGVPC.
OrthoDBi EOG66MQKK.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci DAUT177437:GHLR-1324-MONOMER.

Family and domain databases

Gene3Di 3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view ]
PANTHERi PTHR23132. PTHR23132. 1 hit.
Pfami PF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view ]
SUPFAMi SSF52440. SSF52440. 1 hit.
PROSITEi PS50975. ATP_GRASP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43914 / DSM 3382 / HRM2.

Entry informationi

Entry nameiC0Q8U5_DESAH
AccessioniPrimary (citable) accession number: C0Q8U5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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