Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C0Q8U4 (C0Q8U4_DESAH) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length339 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACN14434.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

D-alanine-D-alanine ligase activity

Inferred from electronic annotation. Source: UniProtKB-EC

metal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C0Q8U4 [UniParc].

Last modified May 5, 2009. Version 1.
Checksum: 518EBE905CC45244

FASTA33936,736
        10         20         30         40         50         60 
MNKTIAIVHN RINNGSLPDE IDVLVQVDAV SQALSGLGYE PIAVPCDLDL NALKQTLTAM 

        70         80         90        100        110        120 
KPAVVFNLVE SLDGHGRLIQ VVPALVEALG YACTGCPAEA IYLTSHKVMA KERMRSLGLP 

       130        140        150        160        170        180 
TADWINPVPL DIPWQGAADL GPTGTWIIKS LWEHASLGLE LENLVKGNSR EIAALLPDRA 

       190        200        210        220        230        240 
SALGGACFAE QFIQGREFNL SLMDTDKGVR VLPPAEIIFK GFDHDQPKIV GYRAKWVQDA 

       250        260        270        280        290        300 
AEYHNTPRSF DFSPKDAPLI ANLERLSLGC WHGFGLRGYA RVDFRVDDLG NPFILEVNTN 

       310        320        330 
PCISPDAGFC AALEQAGISH GQGIHMILKQ SSQPIPAMG 

« Hide

References

[1]"Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide."
Strittmatter A.W., Liesegang H., Rabus R., Decker I., Amann J., Andres S., Henne A., Fricke W.F., Martinez-Arias R., Bartels D., Goesmann A., Krause L., Puhler A., Klenk H.P., Richter M., Schuler M., Glockner F.O., Meyerdierks A., Gottschalk G., Amann R.
Environ. Microbiol. 11:1038-1055(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43914 / DSM 3382 / HRM2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001087 Genomic DNA. Translation: ACN14434.1.
RefSeqYP_002602598.1. NC_012108.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING177437.HRM2_13230.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACN14434; ACN14434; HRM2_13230.
GeneID7501246.
KEGGdat:HRM2_13230.
PATRIC21682287. VBIDesAut25181_1423.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1181.
HOGENOMHOG000011594.
KOK01921.
OMAAGYARID.
OrthoDBEOG69KTVZ.
ProtClustDBCLSK942516.

Enzyme and pathway databases

BioCycDAUT177437:GHLR-1323-MONOMER.

Family and domain databases

Gene3D3.30.470.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC0Q8U4_DESAH
AccessionPrimary (citable) accession number: C0Q8U4
Entry history
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)