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Protein
Submitted name:

DdlB1

Gene

ddlB1

Organism
Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciDAUT177437:GHLR-1323-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DdlB1Imported (EC:6.3.2.4Imported)
Gene namesi
Name:ddlB1Imported
Ordered Locus Names:HRM2_13230Imported
OrganismiDesulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)Imported
Taxonomic identifieri177437 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfobacterium
ProteomesiUP000000442 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi177437.HRM2_13230.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1181.
HOGENOMiHOG000011594.
KOiK01921.
OMAiKSVWEHA.
OrthoDBiEOG69KTVZ.

Family and domain databases

Gene3Di3.30.470.20. 1 hit.
InterProiIPR011761. ATP-grasp.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C0Q8U4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKTIAIVHN RINNGSLPDE IDVLVQVDAV SQALSGLGYE PIAVPCDLDL
60 70 80 90 100
NALKQTLTAM KPAVVFNLVE SLDGHGRLIQ VVPALVEALG YACTGCPAEA
110 120 130 140 150
IYLTSHKVMA KERMRSLGLP TADWINPVPL DIPWQGAADL GPTGTWIIKS
160 170 180 190 200
LWEHASLGLE LENLVKGNSR EIAALLPDRA SALGGACFAE QFIQGREFNL
210 220 230 240 250
SLMDTDKGVR VLPPAEIIFK GFDHDQPKIV GYRAKWVQDA AEYHNTPRSF
260 270 280 290 300
DFSPKDAPLI ANLERLSLGC WHGFGLRGYA RVDFRVDDLG NPFILEVNTN
310 320 330
PCISPDAGFC AALEQAGISH GQGIHMILKQ SSQPIPAMG
Length:339
Mass (Da):36,736
Last modified:May 5, 2009 - v1
Checksum:i518EBE905CC45244
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001087 Genomic DNA. Translation: ACN14434.1.
RefSeqiWP_015903221.1. NC_012108.1.

Genome annotation databases

EnsemblBacteriaiACN14434; ACN14434; HRM2_13230.
KEGGidat:HRM2_13230.
PATRICi21682287. VBIDesAut25181_1423.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001087 Genomic DNA. Translation: ACN14434.1.
RefSeqiWP_015903221.1. NC_012108.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177437.HRM2_13230.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACN14434; ACN14434; HRM2_13230.
KEGGidat:HRM2_13230.
PATRICi21682287. VBIDesAut25181_1423.

Phylogenomic databases

eggNOGiCOG1181.
HOGENOMiHOG000011594.
KOiK01921.
OMAiKSVWEHA.
OrthoDBiEOG69KTVZ.

Enzyme and pathway databases

BioCyciDAUT177437:GHLR-1323-MONOMER.

Family and domain databases

Gene3Di3.30.470.20. 1 hit.
InterProiIPR011761. ATP-grasp.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43914 / DSM 3382 / HRM2Imported.

Entry informationi

Entry nameiC0Q8U4_DESAH
AccessioniPrimary (citable) accession number: C0Q8U4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: July 22, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.