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Protein
Submitted name:

Putative outer membrane secretory protein

Gene

spiA

Organism
Salmonella paratyphi C (strain RKS4594)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative outer membrane secretory proteinImported
Gene namesi
Name:spiAImported
Ordered Locus Names:SPC_2335Imported
OrganismiSalmonella paratyphi C (strain RKS4594)Imported
Taxonomic identifieri476213 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000001599 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini177 – 267Secretin_NInterPro annotationAdd BLAST91

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000245123.
KOiK03219.
OMAiKNGEARM.

Family and domain databases

InterProiView protein in InterPro
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
PfamiView protein in Pfam
PF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiView protein in PROSITE
PS00875. T2SP_D. 1 hit.

Sequencei

Sequence statusi: Complete.

C0Q5Y6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVNKRLILI LLFILNTVKS DELSWKGNDF TLYARQMPLA EVLHLLSENY
60 70 80 90 100
DTAITISPLI TATFSGKIPP GPPVDILNNL AAQYDLLTWF DGSMLYVYPA
110 120 130 140 150
SLLKHQVITF NILSTGRFIH YLRSQNILSS PGCEVKEITG TRAVEVSGVP
160 170 180 190 200
SCLTRISQLA SVLDNALIKR KDSAVSVSIY TLKYATAMDT QYQYRDQSVV
210 220 230 240 250
VPGVVSVLRE MSKTSVPASS TTNGSPATQA LPMFAADPRQ NAVIVRDYAA
260 270 280 290 300
NMAGYRKLIT ELDQRQQMIE ISVKIIDVNA GDINQLGIDW GTAVSLGGKK
310 320 330 340 350
IAFNTGLNDG GASGFSTVIS DTSNFMVRLN ALEKSSQAYV LSQPSVVTLN
360 370 380 390 400
NIQAVLDKNI TFYTKLQGEK VAKLESITTG SLLRVTPRLL NDNGTQKIML
410 420 430 440 450
NLNIQDGQQS DTQSETDPLP EVQNSEIASQ ATLLAGQSLL LGGFKQGKQI
460 470 480 490
HSQNKIPLLG DIPVVGHLFR NDTTQVHSVI RLFLIKASVV NNGISHG
Length:497
Mass (Da):54,126
Last modified:May 5, 2009 - v1
Checksum:i6DB4DEABD33236E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000857 Genomic DNA. Translation: ACN46452.1.
RefSeqiWP_000261292.1. NC_012125.1.

Genome annotation databases

EnsemblBacteriaiACN46452; ACN46452; SPC_2335.
KEGGisei:SPC_2335.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiC0Q5Y6_SALPC
AccessioniPrimary (citable) accession number: C0Q5Y6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: June 7, 2017
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported