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C0Q0F1

- C0Q0F1_SALPC

UniProt

C0Q0F1 - C0Q0F1_SALPC

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Protein
Submitted name:

Nitrite reductase small subunit

Gene

nirD

Organism
Salmonella paratyphi C (strain RKS4594)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. 2 iron, 2 sulfur cluster binding Source: InterPro
  2. nitrite reductase [NAD(P)H] activity Source: InterPro

GO - Biological processi

  1. nitrate assimilation Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSENT476213:GH8J-3606-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Nitrite reductase small subunitImported
Gene namesi
Name:nirDImported
Ordered Locus Names:SPC_3545Imported
OrganismiSalmonella paratyphi C (strain RKS4594)Imported
Taxonomic identifieri476213 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
ProteomesiUP000001599: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiC0Q0F1.

Interactioni

Protein-protein interaction databases

STRINGi476213.SPC_3545.

Structurei

3D structure databases

ProteinModelPortaliC0Q0F1.
SMRiC0Q0F1. Positions 1-108.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2146.
HOGENOMiHOG000128543.
OMAiGVCMEDE.
OrthoDBiEOG6PP9RC.

Family and domain databases

Gene3Di2.102.10.10. 1 hit.
InterProiIPR012748. Nitri_red_NirD.
IPR017881. Nitrite_Rdtase_lsu_NirD_bac.
IPR017941. Rieske_2Fe-2S.
[Graphical view]
SUPFAMiSSF50022. SSF50022. 1 hit.
TIGRFAMsiTIGR02378. nirD_assim_sml. 1 hit.
PROSITEiPS51300. NIRD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C0Q0F1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQWQNICKI DDILPGTGVC ALSGGEQVAI FRPYHSDQVF AISNIDPFFE
60 70 80 90 100
ASVLSRGLIA EHQGELWVAS PLKKQRFRLS DGLCMEDEQF SVKHYDARVK

DGVVQLRG
Length:108
Mass (Da):12,097
Last modified:May 5, 2009 - v1
Checksum:i375C6D13AFF98161
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000857 Genomic DNA. Translation: ACN47628.1.
RefSeqiYP_002639069.1. NC_012125.1.

Genome annotation databases

EnsemblBacteriaiACN47628; ACN47628; SPC_3545.
PATRICi32366031. VBISalEnt12305_3599.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000857 Genomic DNA. Translation: ACN47628.1 .
RefSeqi YP_002639069.1. NC_012125.1.

3D structure databases

ProteinModelPortali C0Q0F1.
SMRi C0Q0F1. Positions 1-108.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 476213.SPC_3545.

Proteomic databases

PRIDEi C0Q0F1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACN47628 ; ACN47628 ; SPC_3545 .
PATRICi 32366031. VBISalEnt12305_3599.

Phylogenomic databases

eggNOGi COG2146.
HOGENOMi HOG000128543.
OMAi GVCMEDE.
OrthoDBi EOG6PP9RC.

Enzyme and pathway databases

BioCyci SENT476213:GH8J-3606-MONOMER.

Family and domain databases

Gene3Di 2.102.10.10. 1 hit.
InterProi IPR012748. Nitri_red_NirD.
IPR017881. Nitrite_Rdtase_lsu_NirD_bac.
IPR017941. Rieske_2Fe-2S.
[Graphical view ]
SUPFAMi SSF50022. SSF50022. 1 hit.
TIGRFAMsi TIGR02378. nirD_assim_sml. 1 hit.
PROSITEi PS51300. NIRD. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Salmonella paratyphi C: genetic divergence from Salmonella choleraesuis and pathogenic convergence with Salmonella typhi."
    Liu W.-Q., Feng Y., Wang Y., Zou Q.-H., Chen F., Guo J.-T., Peng Y.-H., Jin Y., Li Y.-G., Hu S.-N., Johnston R.N., Liu G.-R., Liu S.-L.
    PLoS ONE 4:E4510-E4510(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RKS4594Imported.

Entry informationi

Entry nameiC0Q0F1_SALPC
AccessioniPrimary (citable) accession number: C0Q0F1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: October 1, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3