C0PHB0 (C0PHB0_MAIZE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Uncharacterized protein EMBL ACN34576.1
Organism	Zea mays (Maize) EMBL ACN34576.1
Taxonomic identifier	4577 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › PACMAD clade › Panicoideae › Andropogoneae › Zea

Protein attributes

Sequence length	1025 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	response to cadmium ion Inferred from electronic annotation. Source: EnsemblPlants/Gramene tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Cellular_component	mitochondrion Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	cobalt ion binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C0PHB0 [UniParc]. Last modified May 5, 2009. Version 1. Checksum: 3D261A248CF01992	FASTA	1,025	116,203
	10 20 30 40 50 60 MGLFRAASGL ARLALRRNLS RAAASPFAGS GGAVPGAMPA RYFHSTRPRR FAAPAPRAVP 70 80 90 100 110 120 LSRLTDSFLD GTSSVYLEEL QRAWEADPNS VDESWDNFFR NFVGQAAATS PGLSGQTIQE 130 140 150 160 170 180 SMRLLLLVRA YQVSGHLKAK LDPLGLEERP VPDVLDPGFY GFSEADLDRE FFLGVWMMAG 190 200 210 220 230 240 FLSENRPVQT LRSVLERLEQ AYCGTIGYEY MHIPDREKCN WLRDRIETVN PREYTYDRRQ 250 260 270 280 290 300 VMLDRLIWST QFENFLATKW TTAKRFGLEG AETLIPGMKE MFDRAADLGV ESIVIGMPHR 310 320 330 340 350 360 GRLNVLGNVV RKPLRQIFSE FSGGTKPVNE GEGLYTGTGD VKYHLGTSYD RPTRGGKHIH 370 380 390 400 410 420 LSLVANPSHL EAVDPVVAGK TRAKQYYSND RDRTKNLGVL LHGDGSFSGQ GVVYETLHLS 430 440 450 460 470 480 ALENYTTGGT IHIVVNNQVA FTTDPRSGRS SQYCTDVAKA LDAPIFHVNG DDLEAVVHVC 490 500 510 520 530 540 ELAAEWRQTF HSDVVVDIVC YRRFGHNEID EPSFTQPKMY KVIRNHPSAL EIYQRKLLES 550 560 570 580 590 600 GKISKEDIDK LNKKVSTILN EEFQNSKDYV PNKRDWLSAY WTGFKSPEQI SRIQNTGVKP 610 620 630 640 650 660 EILKRVGEAM TTLPENFNPH RAVKKIFYQR RQMIETGEGI DWAVGEALAF ATLIIEGNHV 670 680 690 700 710 720 RLSGQDVERG TFSHRHSVLH DQETGEQYCP LDHLVMNQDE ELFTVSNSSL SEFAVLGFEL 730 740 750 760 770 780 GYSMENPNSL VIWEAQFGDF SNGAQVIFDQ FLSSGESKWL RQTGLVVCLP HGYDGQGPEH 790 800 810 820 830 840 SSARLERFLQ MSDDNPYVIP EMDPTLRKQI QQCNWQVVNV TTPANYFHVL RRQIHRDFRK 850 860 870 880 890 900 PLIVMSPKNL LRHKDCKSNL SEFDDLAGHP GFDKQGTRFK RLIKDQNNHK DLEEGINRLV 910 920 930 940 950 960 LCSGKVYYEL DEERRKTERT DVAICRVEQL CPFPYDLIQR ELKRYPNAEI VWCQEEPMNM 970 980 990 1000 1010 1020 GAYSYINPRL LTAMKALGRG GIEDIKYVGR APSAATATGF YSVHVQEQTE LVQKALQRDP INYPF

References

[1]

"Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs." Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J., Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J., Walbot V., Yu Y. PLoS Genet. 5:E1000740-E1000740(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: B73 EMBL ACN34576.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BT067679 mRNA. Translation: ACN34576.1.
RefSeq	NP_001169698.1. NM_001176227.1.
UniGene	Zm.15080.
3D structure databases
ModBase	Search...
Proteomic databases
PRIDE	C0PHB0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	100383579.
KEGG	zma:100383579.
Organism-specific databases
Gramene	C0PHB0.
Phylogenomic databases
HOGENOM	HOG000259586.
KO	K00164.
OMA	TKFLGQK.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C0PHB0_MAIZE

Accession

Primary (citable) accession number: C0PHB0

Entry history

Integrated into UniProtKB/TrEMBL:	May 5, 2009
Last sequence update:	May 5, 2009
Last modified:	March 6, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)