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C0PHB0 (C0PHB0_MAIZE) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismZea mays (Maize) EMBL ACN34576.1
Taxonomic identifier4577 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Protein attributes

Sequence length1025 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
C0PHB0 [UniParc].

Last modified May 5, 2009. Version 1.
Checksum: 3D261A248CF01992

FASTA1,025116,203
        10         20         30         40         50         60 
MGLFRAASGL ARLALRRNLS RAAASPFAGS GGAVPGAMPA RYFHSTRPRR FAAPAPRAVP 

        70         80         90        100        110        120 
LSRLTDSFLD GTSSVYLEEL QRAWEADPNS VDESWDNFFR NFVGQAAATS PGLSGQTIQE 

       130        140        150        160        170        180 
SMRLLLLVRA YQVSGHLKAK LDPLGLEERP VPDVLDPGFY GFSEADLDRE FFLGVWMMAG 

       190        200        210        220        230        240 
FLSENRPVQT LRSVLERLEQ AYCGTIGYEY MHIPDREKCN WLRDRIETVN PREYTYDRRQ 

       250        260        270        280        290        300 
VMLDRLIWST QFENFLATKW TTAKRFGLEG AETLIPGMKE MFDRAADLGV ESIVIGMPHR 

       310        320        330        340        350        360 
GRLNVLGNVV RKPLRQIFSE FSGGTKPVNE GEGLYTGTGD VKYHLGTSYD RPTRGGKHIH 

       370        380        390        400        410        420 
LSLVANPSHL EAVDPVVAGK TRAKQYYSND RDRTKNLGVL LHGDGSFSGQ GVVYETLHLS 

       430        440        450        460        470        480 
ALENYTTGGT IHIVVNNQVA FTTDPRSGRS SQYCTDVAKA LDAPIFHVNG DDLEAVVHVC 

       490        500        510        520        530        540 
ELAAEWRQTF HSDVVVDIVC YRRFGHNEID EPSFTQPKMY KVIRNHPSAL EIYQRKLLES 

       550        560        570        580        590        600 
GKISKEDIDK LNKKVSTILN EEFQNSKDYV PNKRDWLSAY WTGFKSPEQI SRIQNTGVKP 

       610        620        630        640        650        660 
EILKRVGEAM TTLPENFNPH RAVKKIFYQR RQMIETGEGI DWAVGEALAF ATLIIEGNHV 

       670        680        690        700        710        720 
RLSGQDVERG TFSHRHSVLH DQETGEQYCP LDHLVMNQDE ELFTVSNSSL SEFAVLGFEL 

       730        740        750        760        770        780 
GYSMENPNSL VIWEAQFGDF SNGAQVIFDQ FLSSGESKWL RQTGLVVCLP HGYDGQGPEH 

       790        800        810        820        830        840 
SSARLERFLQ MSDDNPYVIP EMDPTLRKQI QQCNWQVVNV TTPANYFHVL RRQIHRDFRK 

       850        860        870        880        890        900 
PLIVMSPKNL LRHKDCKSNL SEFDDLAGHP GFDKQGTRFK RLIKDQNNHK DLEEGINRLV 

       910        920        930        940        950        960 
LCSGKVYYEL DEERRKTERT DVAICRVEQL CPFPYDLIQR ELKRYPNAEI VWCQEEPMNM 

       970        980        990       1000       1010       1020 
GAYSYINPRL LTAMKALGRG GIEDIKYVGR APSAATATGF YSVHVQEQTE LVQKALQRDP 


INYPF 

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References

[1]"Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs."
Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J., Angelova A., Collura K., Wissotski M., Ashley E., Morrow D., Fernandes J., Walbot V., Yu Y.
PLoS Genet. 5:E1000740-E1000740(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B73 EMBL ACN34576.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT067679 mRNA. Translation: ACN34576.1.
RefSeqNP_001169698.1. NM_001176227.1.
UniGeneZm.15080.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEC0PHB0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100383579.
KEGGzma:100383579.

Organism-specific databases

GrameneC0PHB0.

Phylogenomic databases

HOGENOMHOG000259586.
KOK00164.
OMAHERINRE.

Family and domain databases

InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC0PHB0_MAIZE
AccessionPrimary (citable) accession number: C0PHB0
Entry history
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: March 19, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)