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C0PGE4

- C0PGE4_MAIZE

UniProt

C0PGE4 - C0PGE4_MAIZE

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Protein

Alpha-amylase

Gene
N/A
Organism
Zea mays (Maize)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei208 – 2081NucleophileUniRule annotation
Active sitei234 – 2341Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
OrganismiZea mays (Maize)Imported
Taxonomic identifieri4577 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

Organism-specific databases

GrameneiC0PGE4.

Structurei

3D structure databases

ProteinModelPortaliC0PGE4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000239525.
KOiK01176.
OMAiHRCAEKK.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C0PGE4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMKHSSSLCL LFLLALCTTL LACGLVQAQV LFQGFNWESC KQQGGWYNRL
60 70 80 90 100
KAQVDDIAKA GVTHVWLPPP SHSVSPQGYM PGRLYDLDAS KYGTAAELKS
110 120 130 140 150
LIAAFHGRGV QCVADIVINH RCAEKKDARG VYCIFEGGTP DDRLDWGPGM
160 170 180 190 200
ICSDDTQYSD GTGHRDTGEG FAAAPDIDHL NPRVQRELSA WLNWLRSDAV
210 220 230 240 250
GFDGWRLDFA KGYSPAVARM YVESTGPPSF VVAEIWNSLS YSGDGKPAPN
260 270 280 290 300
QDQCRQELLD WTRAVGGPAM AFDFPTKGLL QAGVQGELWR LRDSSGNAAG
310 320 330 340 350
LIGWAPEKAV TFVDNHDTGS TQKLWPFPSD KVMQGYAYIL THPGVPCIFY
360 370 380 390 400
DHMFDWNLKQ EISTLSAIRA RNGIRAGSKL RILVADADAY VAVVDEKVMV
410 420 430 440
KIGTRYGVSS VVPSDFHPAA HGKDYCVWEK ASLRVPAGRH L
Length:441
Mass (Da):48,416
Last modified:May 5, 2009 - v1
Checksum:i3AC31F7E00097F23
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BT067363 mRNA. Translation: ACN34260.1.
RefSeqiNP_001169611.1. NM_001176140.1.
UniGeneiZm.38505.

Genome annotation databases

GeneIDi100383492.
KEGGizma:100383492.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BT067363 mRNA. Translation: ACN34260.1 .
RefSeqi NP_001169611.1. NM_001176140.1.
UniGenei Zm.38505.

3D structure databases

ProteinModelPortali C0PGE4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 100383492.
KEGGi zma:100383492.

Organism-specific databases

Gramenei C0PGE4.

Phylogenomic databases

HOGENOMi HOG000239525.
KOi K01176.
OMAi HRCAEKK.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001028. Alph-amls_plant. 1 hit.
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: B73Imported.

Entry informationi

Entry nameiC0PGE4_MAIZE
AccessioniPrimary (citable) accession number: C0PGE4
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: October 1, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)