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C0PGE4

- C0PGE4_MAIZE

UniProt

C0PGE4 - C0PGE4_MAIZE

Protein

Alpha-amylase

Gene
N/A
Organism
Zea mays (Maize)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (05 May 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei208 – 2081NucleophileUniRule annotation
    Active sitei234 – 2341Proton donorUniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    OrganismiZea mays (Maize)Imported
    Taxonomic identifieri4577 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogoneaeZea

    Organism-specific databases

    GrameneiC0PGE4.

    Structurei

    3D structure databases

    ProteinModelPortaliC0PGE4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000239525.
    KOiK01176.
    OMAiHRCAEKK.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR012850. A-amylase_bs_C.
    IPR013775. A-amylase_pln.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001028. Alph-amls_plant. 1 hit.
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C0PGE4-1 [UniParc]FASTAAdd to Basket

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    MMKHSSSLCL LFLLALCTTL LACGLVQAQV LFQGFNWESC KQQGGWYNRL    50
    KAQVDDIAKA GVTHVWLPPP SHSVSPQGYM PGRLYDLDAS KYGTAAELKS 100
    LIAAFHGRGV QCVADIVINH RCAEKKDARG VYCIFEGGTP DDRLDWGPGM 150
    ICSDDTQYSD GTGHRDTGEG FAAAPDIDHL NPRVQRELSA WLNWLRSDAV 200
    GFDGWRLDFA KGYSPAVARM YVESTGPPSF VVAEIWNSLS YSGDGKPAPN 250
    QDQCRQELLD WTRAVGGPAM AFDFPTKGLL QAGVQGELWR LRDSSGNAAG 300
    LIGWAPEKAV TFVDNHDTGS TQKLWPFPSD KVMQGYAYIL THPGVPCIFY 350
    DHMFDWNLKQ EISTLSAIRA RNGIRAGSKL RILVADADAY VAVVDEKVMV 400
    KIGTRYGVSS VVPSDFHPAA HGKDYCVWEK ASLRVPAGRH L 441
    Length:441
    Mass (Da):48,416
    Last modified:May 5, 2009 - v1
    Checksum:i3AC31F7E00097F23
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT067363 mRNA. Translation: ACN34260.1.
    RefSeqiNP_001169611.1. NM_001176140.1.
    UniGeneiZm.38505.

    Genome annotation databases

    GeneIDi100383492.
    KEGGizma:100383492.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BT067363 mRNA. Translation: ACN34260.1 .
    RefSeqi NP_001169611.1. NM_001176140.1.
    UniGenei Zm.38505.

    3D structure databases

    ProteinModelPortali C0PGE4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100383492.
    KEGGi zma:100383492.

    Organism-specific databases

    Gramenei C0PGE4.

    Phylogenomic databases

    HOGENOMi HOG000239525.
    KOi K01176.
    OMAi HRCAEKK.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR012850. A-amylase_bs_C.
    IPR013775. A-amylase_pln.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001028. Alph-amls_plant. 1 hit.
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: B73Imported.

    Entry informationi

    Entry nameiC0PGE4_MAIZE
    AccessioniPrimary (citable) accession number: C0PGE4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 5, 2009
    Last sequence update: May 5, 2009
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)