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C0MFQ6

- C0MFQ6_STRS7

UniProt

C0MFQ6 - C0MFQ6_STRS7

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Protein
Alpha-amylase
Gene
SZO_02500
Organism
Streptococcus equi subsp. zooepidemicus (strain H70)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSEQU40041:GC8B-300-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:SZO_02500Imported
OrganismiStreptococcus equi subsp. zooepidemicus (strain H70)
Taxonomic identifieri553483 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000001368: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4343 PredictedImported
Add
BLAST
Chaini44 – 469426 PredictedImported
PRO_5000453595Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi553483.SZO_02500.

Structurei

3D structure databases

ProteinModelPortaliC0MFQ6.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000008732.
KOiK01176.
OMAiWQRYQPQ.
OrthoDBiEOG6F55CH.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0MFQ6-1 [UniParc]FASTAAdd to Basket

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MVTHKTKRFL KALSVTSLTL GLVLSGLTPL TSASLASAQE VQSANQPVAM    50
KDGAILHAWC WSFNTIKENM SAIKEAGYTS IQTSPINAVI KGDGGSKDLK 100
NWYYHYQPTD YTIGNYQLGT EEEFKAMAQE ADKYGINIIV DAVLNHTTSE 150
FNAVSPNIKA LGDWTHGNDK IENFNDRYQI TQKSLLGLYD FNTQNRAVQE 200
YMLNYLKRAV ADGADGFRYD AAKHIELPGE HNSDFWKVIL NNGAKFQYGE 250
ILQGDACNEA GYGNIMGVTA SNYGKLIRKV LGQGYVKDWD LVNFQVHGVS 300
EDKLVTWVES HDTYANDDEE STKLTDEDIK LGWGIIAARN EGAPLFFSRP 350
RGGGGQNGRF PGKSQIGDAG SDLFKDPTIV AINQFRNRMN GQSEYIRNPG 400
MDQGLVMIER GQKGAVITNL TIVDKKFSST TTLDDGDYKD AVTGTVYHVS 450
NHNITGHLAK KSVAVLLPA 469
Length:469
Mass (Da):51,663
Last modified:May 5, 2009 - v1
Checksum:iC1E7A62EB4C20573
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM204884 Genomic DNA. Translation: CAW98010.1.
RefSeqiYP_002743809.1. NC_012470.1.

Genome annotation databases

EnsemblBacteriaiCAW98010; CAW98010; SZO_02500.
GeneIDi7695202.
KEGGiseq:SZO_02500.
PATRICi19650100. VBIStrEqu35012_0272.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FM204884 Genomic DNA. Translation: CAW98010.1 .
RefSeqi YP_002743809.1. NC_012470.1.

3D structure databases

ProteinModelPortali C0MFQ6.
ModBasei Search...

Protein-protein interaction databases

STRINGi 553483.SZO_02500.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAW98010 ; CAW98010 ; SZO_02500 .
GeneIDi 7695202.
KEGGi seq:SZO_02500.
PATRICi 19650100. VBIStrEqu35012_0272.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000008732.
KOi K01176.
OMAi WQRYQPQ.
OrthoDBi EOG6F55CH.

Enzyme and pathway databases

BioCyci SEQU40041:GC8B-300-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H70Imported.

Entry informationi

Entry nameiC0MFQ6_STRS7
AccessioniPrimary (citable) accession number: C0MFQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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