Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C0MFQ6

- C0MFQ6_STRS7

UniProt

C0MFQ6 - C0MFQ6_STRS7

Protein

Alpha-amylase

Gene

SZO_02500

Organism
Streptococcus equi subsp. zooepidemicus (strain H70)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (05 May 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciSEQU40041:GC8B-300-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:SZO_02500Imported
    OrganismiStreptococcus equi subsp. zooepidemicus (strain H70)Imported
    Taxonomic identifieri553483 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
    ProteomesiUP000001368: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 4343 PotentialImportedAdd
    BLAST
    Chaini44 – 469426 PotentialImportedPRO_5000453595Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi553483.SZO_02500.

    Structurei

    3D structure databases

    ProteinModelPortaliC0MFQ6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000008732.
    KOiK01176.
    OMAiWQRYQPQ.
    OrthoDBiEOG6F55CH.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C0MFQ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVTHKTKRFL KALSVTSLTL GLVLSGLTPL TSASLASAQE VQSANQPVAM    50
    KDGAILHAWC WSFNTIKENM SAIKEAGYTS IQTSPINAVI KGDGGSKDLK 100
    NWYYHYQPTD YTIGNYQLGT EEEFKAMAQE ADKYGINIIV DAVLNHTTSE 150
    FNAVSPNIKA LGDWTHGNDK IENFNDRYQI TQKSLLGLYD FNTQNRAVQE 200
    YMLNYLKRAV ADGADGFRYD AAKHIELPGE HNSDFWKVIL NNGAKFQYGE 250
    ILQGDACNEA GYGNIMGVTA SNYGKLIRKV LGQGYVKDWD LVNFQVHGVS 300
    EDKLVTWVES HDTYANDDEE STKLTDEDIK LGWGIIAARN EGAPLFFSRP 350
    RGGGGQNGRF PGKSQIGDAG SDLFKDPTIV AINQFRNRMN GQSEYIRNPG 400
    MDQGLVMIER GQKGAVITNL TIVDKKFSST TTLDDGDYKD AVTGTVYHVS 450
    NHNITGHLAK KSVAVLLPA 469
    Length:469
    Mass (Da):51,663
    Last modified:May 5, 2009 - v1
    Checksum:iC1E7A62EB4C20573
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM204884 Genomic DNA. Translation: CAW98010.1.
    RefSeqiYP_002743809.1. NC_012470.1.

    Genome annotation databases

    EnsemblBacteriaiCAW98010; CAW98010; SZO_02500.
    GeneIDi7695202.
    KEGGiseq:SZO_02500.
    PATRICi19650100. VBIStrEqu35012_0272.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FM204884 Genomic DNA. Translation: CAW98010.1 .
    RefSeqi YP_002743809.1. NC_012470.1.

    3D structure databases

    ProteinModelPortali C0MFQ6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 553483.SZO_02500.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAW98010 ; CAW98010 ; SZO_02500 .
    GeneIDi 7695202.
    KEGGi seq:SZO_02500.
    PATRICi 19650100. VBIStrEqu35012_0272.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000008732.
    KOi K01176.
    OMAi WQRYQPQ.
    OrthoDBi EOG6F55CH.

    Enzyme and pathway databases

    BioCyci SEQU40041:GC8B-300-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: H70Imported.

    Entry informationi

    Entry nameiC0MFQ6_STRS7
    AccessioniPrimary (citable) accession number: C0MFQ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 5, 2009
    Last sequence update: May 5, 2009
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3