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Protein

Alpha-amylase

Gene

SZO_02500

Organism
Streptococcus equi subsp. zooepidemicus (strain H70)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:SZO_02500Imported
OrganismiStreptococcus equi subsp. zooepidemicus (strain H70)Imported
Taxonomic identifieri553483 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000001368 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500290086436 – 469Alpha-amylaseSequence analysisAdd BLAST434

Structurei

3D structure databases

ProteinModelPortaliC0MFQ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini53 – 386AamyInterPro annotationAdd BLAST334

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000008732.
KOiK01176.
OMAiYCFGQAL.
OrthoDBiPOG091H0CDS.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR006046. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C0MFQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTHKTKRFL KALSVTSLTL GLVLSGLTPL TSASLASAQE VQSANQPVAM
60 70 80 90 100
KDGAILHAWC WSFNTIKENM SAIKEAGYTS IQTSPINAVI KGDGGSKDLK
110 120 130 140 150
NWYYHYQPTD YTIGNYQLGT EEEFKAMAQE ADKYGINIIV DAVLNHTTSE
160 170 180 190 200
FNAVSPNIKA LGDWTHGNDK IENFNDRYQI TQKSLLGLYD FNTQNRAVQE
210 220 230 240 250
YMLNYLKRAV ADGADGFRYD AAKHIELPGE HNSDFWKVIL NNGAKFQYGE
260 270 280 290 300
ILQGDACNEA GYGNIMGVTA SNYGKLIRKV LGQGYVKDWD LVNFQVHGVS
310 320 330 340 350
EDKLVTWVES HDTYANDDEE STKLTDEDIK LGWGIIAARN EGAPLFFSRP
360 370 380 390 400
RGGGGQNGRF PGKSQIGDAG SDLFKDPTIV AINQFRNRMN GQSEYIRNPG
410 420 430 440 450
MDQGLVMIER GQKGAVITNL TIVDKKFSST TTLDDGDYKD AVTGTVYHVS
460
NHNITGHLAK KSVAVLLPA
Length:469
Mass (Da):51,663
Last modified:May 5, 2009 - v1
Checksum:iC1E7A62EB4C20573
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM204884 Genomic DNA. Translation: CAW98010.1.
RefSeqiWP_012677366.1. NC_012470.1.

Genome annotation databases

EnsemblBacteriaiCAW98010; CAW98010; SZO_02500.
GeneIDi7695202.
KEGGiseq:SZO_02500.
PATRICi19650100. VBIStrEqu35012_0272.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM204884 Genomic DNA. Translation: CAW98010.1.
RefSeqiWP_012677366.1. NC_012470.1.

3D structure databases

ProteinModelPortaliC0MFQ6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAW98010; CAW98010; SZO_02500.
GeneIDi7695202.
KEGGiseq:SZO_02500.
PATRICi19650100. VBIStrEqu35012_0272.

Phylogenomic databases

HOGENOMiHOG000008732.
KOiK01176.
OMAiYCFGQAL.
OrthoDBiPOG091H0CDS.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR006046. Alpha_amylase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC0MFQ6_STRS7
AccessioniPrimary (citable) accession number: C0MFQ6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: February 15, 2017
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.