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Protein

Alpha-amylase

Gene

SZO_02500

Organism
Streptococcus equi subsp. zooepidemicus (strain H70)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciSEQU40041:GC8B-300-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:SZO_02500Imported
OrganismiStreptococcus equi subsp. zooepidemicus (strain H70)Imported
Taxonomic identifieri553483 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000001368: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4343 PotentialImportedAdd
BLAST
Chaini44 – 469426 PotentialImportedPRO_5000453595Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi553483.SZO_02500.

Structurei

3D structure databases

ProteinModelPortaliC0MFQ6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000008732.
KOiK01176.
OMAiNEWLAYA.
OrthoDBiEOG6F55CH.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0MFQ6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVTHKTKRFL KALSVTSLTL GLVLSGLTPL TSASLASAQE VQSANQPVAM
60 70 80 90 100
KDGAILHAWC WSFNTIKENM SAIKEAGYTS IQTSPINAVI KGDGGSKDLK
110 120 130 140 150
NWYYHYQPTD YTIGNYQLGT EEEFKAMAQE ADKYGINIIV DAVLNHTTSE
160 170 180 190 200
FNAVSPNIKA LGDWTHGNDK IENFNDRYQI TQKSLLGLYD FNTQNRAVQE
210 220 230 240 250
YMLNYLKRAV ADGADGFRYD AAKHIELPGE HNSDFWKVIL NNGAKFQYGE
260 270 280 290 300
ILQGDACNEA GYGNIMGVTA SNYGKLIRKV LGQGYVKDWD LVNFQVHGVS
310 320 330 340 350
EDKLVTWVES HDTYANDDEE STKLTDEDIK LGWGIIAARN EGAPLFFSRP
360 370 380 390 400
RGGGGQNGRF PGKSQIGDAG SDLFKDPTIV AINQFRNRMN GQSEYIRNPG
410 420 430 440 450
MDQGLVMIER GQKGAVITNL TIVDKKFSST TTLDDGDYKD AVTGTVYHVS
460
NHNITGHLAK KSVAVLLPA
Length:469
Mass (Da):51,663
Last modified:May 5, 2009 - v1
Checksum:iC1E7A62EB4C20573
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM204884 Genomic DNA. Translation: CAW98010.1.
RefSeqiYP_002743809.1. NC_012470.1.

Genome annotation databases

EnsemblBacteriaiCAW98010; CAW98010; SZO_02500.
GeneIDi7695202.
KEGGiseq:SZO_02500.
PATRICi19650100. VBIStrEqu35012_0272.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM204884 Genomic DNA. Translation: CAW98010.1.
RefSeqiYP_002743809.1. NC_012470.1.

3D structure databases

ProteinModelPortaliC0MFQ6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi553483.SZO_02500.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAW98010; CAW98010; SZO_02500.
GeneIDi7695202.
KEGGiseq:SZO_02500.
PATRICi19650100. VBIStrEqu35012_0272.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000008732.
KOiK01176.
OMAiNEWLAYA.
OrthoDBiEOG6F55CH.

Enzyme and pathway databases

BioCyciSEQU40041:GC8B-300-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H70Imported.

Entry informationi

Entry nameiC0MFQ6_STRS7
AccessioniPrimary (citable) accession number: C0MFQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: January 7, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.