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C0MFQ6 (C0MFQ6_STRS7) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   DomainSignal EMBL CAW98010.1
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4343 Potential EMBL CAW98010.1
Chain44 – 469426 Potential EMBL CAW98010.1
PRO_5000453595

Sequences

Sequence LengthMass (Da)Tools
C0MFQ6 [UniParc].

Last modified May 5, 2009. Version 1.
Checksum: C1E7A62EB4C20573

FASTA46951,663
        10         20         30         40         50         60 
MVTHKTKRFL KALSVTSLTL GLVLSGLTPL TSASLASAQE VQSANQPVAM KDGAILHAWC 

        70         80         90        100        110        120 
WSFNTIKENM SAIKEAGYTS IQTSPINAVI KGDGGSKDLK NWYYHYQPTD YTIGNYQLGT 

       130        140        150        160        170        180 
EEEFKAMAQE ADKYGINIIV DAVLNHTTSE FNAVSPNIKA LGDWTHGNDK IENFNDRYQI 

       190        200        210        220        230        240 
TQKSLLGLYD FNTQNRAVQE YMLNYLKRAV ADGADGFRYD AAKHIELPGE HNSDFWKVIL 

       250        260        270        280        290        300 
NNGAKFQYGE ILQGDACNEA GYGNIMGVTA SNYGKLIRKV LGQGYVKDWD LVNFQVHGVS 

       310        320        330        340        350        360 
EDKLVTWVES HDTYANDDEE STKLTDEDIK LGWGIIAARN EGAPLFFSRP RGGGGQNGRF 

       370        380        390        400        410        420 
PGKSQIGDAG SDLFKDPTIV AINQFRNRMN GQSEYIRNPG MDQGLVMIER GQKGAVITNL 

       430        440        450        460 
TIVDKKFSST TTLDDGDYKD AVTGTVYHVS NHNITGHLAK KSVAVLLPA 

« Hide

References

[1]"Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens."
Holden M.T.G., Heather Z., Paillot R., Steward K.F., Webb K., Ainslie F., Jourdan T., Bason N.C., Holroyd N.E., Mungall K., Quail M.A., Sanders M., Simmonds M., Willey D., Brooks K., Aanensen D.M., Spratt B.G., Jolley K.A. expand/collapse author list , Maiden M.C.J., Kehoe M., Chanter N., Bentley S.D., Robinson C., Maskell D.J., Parkhill J., Waller A.S.
PLoS Pathog. 5:E1000346-E1000346(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: H70 EMBL CAW98010.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM204884 Genomic DNA. Translation: CAW98010.1.
RefSeqYP_002743809.1. NC_012470.1.

3D structure databases

ProteinModelPortalC0MFQ6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING553483.SZO_02500.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAW98010; CAW98010; SZO_02500.
GeneID7695202.
KEGGseq:SZO_02500.
PATRIC19650100. VBIStrEqu35012_0272.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000008732.
KOK01176.
OMAWQRYQPQ.
OrthoDBEOG6F55CH.

Enzyme and pathway databases

BioCycSEQU40041:GC8B-300-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC0MFQ6_STRS7
AccessionPrimary (citable) accession number: C0MFQ6
Entry history
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)