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Protein

Ribosomal RNA small subunit methyltransferase B

Gene

SEQ_1776

Organism
Streptococcus equi subsp. equi (strain 4047)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationImported, Transferase

Keywords - Biological processi

rRNA processingSAAS annotation

Keywords - Ligandi

RNA-bindingSAAS annotation, S-adenosyl-L-methionineSAAS annotation

Enzyme and pathway databases

BioCyciSEQU553482:GJOY-1769-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase BSAAS annotation (EC:2.1.1.-SAAS annotation)
Gene namesi
Ordered Locus Names:SEQ_1776Imported
OrganismiStreptococcus equi subsp. equi (strain 4047)Imported
Taxonomic identifieri553482 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
Proteomesi
  • UP000001365 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliC0M779.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini168 – 441274SAM_MT_RSMB_NOPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG6091D0.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C0M779-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLANDWKKS ARGQALLIVE DIFDHGAYSN LALKHQLANQ FLSDKDKALV
60 70 80 90 100
TEIVYGTISR KITLEWYLAH YIEDRDRLDK WVYYLLMLSL YQLAYLDKVP
110 120 130 140 150
AHAIVNDAVN LAKARAHGRG ADKLVNAVLR QLTNKPLPDI KSIKRKNKYY
160 170 180 190 200
AVAYSVPVWL VKKLIDQFGE ERAVAIMESL FVRSRASIRV TDLTKLDEIK
210 220 230 240 250
QATGSEQSLL ARTGLTKRAG NFAASSYFIN GDITIQDETS QLVAPTLDIQ
260 270 280 290 300
GQEMILDACS APGGKTAHIA SYLTSGKVVA LDLYEHKLAL VNENAKRLGV
310 320 330 340 350
ADRIETKVLD AREVHKHFAK NSFDKILVDA PCSGIGLIRR KPDIKYNKEG
360 370 380 390 400
QDFQQLQEIQ LEILSSVCQT LRKGGIITYS TCTIFDEENF QVIDKFLQRH
410 420 430 440
PNFEQVTLKH AQADIVKDGC LMITPEQYQT DGFFIGQVRR VL
Length:442
Mass (Da):49,818
Last modified:May 5, 2009 - v1
Checksum:i2BF7920ED1896EF4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM204883 Genomic DNA. Translation: CAW94888.1.

Genome annotation databases

EnsemblBacteriaiCAW94888; CAW94888; SEQ_1776.
KEGGiseu:SEQ_1776.
PATRICi19648430. VBIStrEqu13040_1818.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FM204883 Genomic DNA. Translation: CAW94888.1.

3D structure databases

ProteinModelPortaliC0M779.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAW94888; CAW94888; SEQ_1776.
KEGGiseu:SEQ_1776.
PATRICi19648430. VBIStrEqu13040_1818.

Phylogenomic databases

HOGENOMiHOG000037300.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiEOG6091D0.

Enzyme and pathway databases

BioCyciSEQU553482:GJOY-1769-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR018314. Fmu/NOL1/Nop2p_CS.
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR004573. rRNA_ssu_MeTfrase_B.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PfamiPF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
[Graphical view]
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00563. rsmB. 1 hit.
PROSITEiPS01153. NOL1_NOP2_SUN. 1 hit.
PS51686. SAM_MT_RSMB_NOP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 4047Imported.

Entry informationi

Entry nameiC0M779_STRE4
AccessioniPrimary (citable) accession number: C0M779
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: June 8, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.