Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

TATA-box binding protein N-terminal domain splice variant

Gene
N/A
Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: Ensembl
  2. sequence-specific DNA binding transcription factor activity Source: Ensembl

GO - Biological processi

  1. DNA-templated transcription, initiation Source: InterPro
  2. positive regulation of transcription, DNA-templated Source: Ensembl
  3. spermatogenesis Source: Ensembl
  4. transcription from RNA polymerase III promoter Source: Ensembl
  5. transcription from RNA polymerase II promoter Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
TATA-box binding protein N-terminal domain splice variantImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: Ensembl
  2. female pronucleus Source: Ensembl
  3. male pronucleus Source: Ensembl
  4. transcription factor TFIID complex Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiC0LUL1.
ExpressionAtlasiC0LUL1. baseline and differential.

Family & Domainsi

Family and domain databases

InterProiIPR000814. TBP.
[Graphical view]
PANTHERiPTHR10126. PTHR10126. 1 hit.

Sequencei

Sequence statusi: Complete.

C0LUL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQNNSLPPY AQGLASPQGA MTPGIPIFSP MMPYGTGLTP QPIQNTNSLS
60 70 80 90 100
ILEEQQRQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQAVAAAA
110 120 130 140 150
VQQSTSQQAT QGTSGQAPQL FHSQTLTTAP LPGTTPLYPS PMTPMTPITP
160
ATPASESSGI VPQLQ
Length:165
Mass (Da):17,998
Last modified:May 5, 2009 - v1
Checksum:i8DA4E5B15087BBEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ770048 mRNA. Translation: ACN86311.1.
UniGeneiHs.590872.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ770048 mRNA. Translation: ACN86311.1.
UniGeneiHs.590872.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

NextBioi35482438.

Gene expression databases

BgeeiC0LUL1.
ExpressionAtlasiC0LUL1. baseline and differential.

Family and domain databases

InterProiIPR000814. TBP.
[Graphical view]
PANTHERiPTHR10126. PTHR10126. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "A splice variant of the TATA-box binding protein encoding the polyglutamine-containing N-terminal domain that accumulates in Alzheimer's disease."
    Reid S.J., Whittaker D.J., Greenwood D., Snell R.G.
    Brain Res. 1268:190-199(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Reid S., Whittaker D.J., Greenwood D., Snell R.G.
    Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiC0LUL1_HUMAN
AccessioniPrimary (citable) accession number: C0LUL1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 5, 2009
Last sequence update: May 5, 2009
Last modified: November 26, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.