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C0LGQ9

- Y4294_ARATH

UniProt

C0LGQ9 - Y4294_ARATH

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Protein

Probable LRR receptor-like serine/threonine-protein kinase At4g20940

Gene

At4g20940

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei782 – 7821ATPPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi760 – 7689ATPPROSITE-ProRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. protein serine/threonine kinase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Receptor, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT4G20940-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At4g20940 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At4g20940
ORF Names:T13K14.100
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G20940.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini2 – 614613ExtracellularSequence AnalysisAdd
BLAST
Transmembranei615 – 63521HelicalSequence AnalysisAdd
BLAST
Topological domaini636 – 1037402CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedSequence Analysis
Chaini2 – 10371036Probable LRR receptor-like serine/threonine-protein kinase At4g20940PRO_0000387555Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi2 – 21N-myristoyl glycineSequence Analysis
Glycosylationi76 – 761N-linked (GlcNAc...)Sequence Analysis
Glycosylationi87 – 871N-linked (GlcNAc...)Sequence Analysis
Glycosylationi130 – 1301N-linked (GlcNAc...)Sequence Analysis
Glycosylationi137 – 1371N-linked (GlcNAc...)Sequence Analysis
Glycosylationi180 – 1801N-linked (GlcNAc...)Sequence Analysis
Glycosylationi223 – 2231N-linked (GlcNAc...)Sequence Analysis
Glycosylationi253 – 2531N-linked (GlcNAc...)Sequence Analysis
Glycosylationi331 – 3311N-linked (GlcNAc...)Sequence Analysis
Glycosylationi378 – 3781N-linked (GlcNAc...)Sequence Analysis
Glycosylationi416 – 4161N-linked (GlcNAc...)Sequence Analysis
Glycosylationi518 – 5181N-linked (GlcNAc...)Sequence Analysis
Glycosylationi550 – 5501N-linked (GlcNAc...)Sequence Analysis
Glycosylationi559 – 5591N-linked (GlcNAc...)Sequence Analysis
Glycosylationi605 – 6051N-linked (GlcNAc...)Sequence Analysis
Modified residuei688 – 6881Phosphoserine1 Publication

Keywords - PTMi

Glycoprotein, Lipoprotein, Myristate, Phosphoprotein

Proteomic databases

PaxDbiC0LGQ9.
PRIDEiC0LGQ9.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G20940.1-P.

Structurei

3D structure databases

ProteinModelPortaliC0LGQ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati57 – 7721LRR 1Add
BLAST
Repeati78 – 10326LRR 2Add
BLAST
Repeati105 – 12521LRR 3Add
BLAST
Repeati126 – 14924LRR 4Add
BLAST
Repeati150 – 17324LRR 5Add
BLAST
Repeati175 – 19622LRR 6Add
BLAST
Repeati197 – 22125LRR 7Add
BLAST
Repeati223 – 24422LRR 8Add
BLAST
Repeati246 – 26924LRR 9Add
BLAST
Repeati270 – 29324LRR 10Add
BLAST
Repeati294 – 31724LRR 11Add
BLAST
Repeati319 – 34123LRR 12Add
BLAST
Repeati342 – 36827LRR 13Add
BLAST
Repeati385 – 40925LRR 14Add
BLAST
Repeati410 – 43324LRR 15Add
BLAST
Repeati434 – 45825LRR 16Add
BLAST
Repeati460 – 48223LRR 17Add
BLAST
Repeati483 – 50523LRR 18Add
BLAST
Repeati506 – 53025LRR 19Add
BLAST
Repeati532 – 55423LRR 20Add
BLAST
Repeati556 – 57621LRR 21Add
BLAST
Domaini754 – 1037284Protein kinasePROSITE-ProRule annotationAdd
BLAST

Domaini

The protein kinase domain is predicted to be catalytically inactive.

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
Contains 21 LRR (leucine-rich) repeats.Curated
Contains 1 protein kinase domain.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG256848.
InParanoidiC0LGQ9.
PhylomeDBiC0LGQ9.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
[Graphical view]
PfamiPF00560. LRR_1. 8 hits.
PF13855. LRR_8. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0LGQ9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGQLPSQDIM ALLEFKKGIK HDPTGFVLNS WNDESIDFNG CPSSWNGIVC
60 70 80 90 100
NGGNVAGVVL DNLGLTADAD FSLFSNLTKL VKLSMSNNSL SGVLPNDLGS
110 120 130 140 150
FKSLQFLDLS DNLFSSSLPK EIGRSVSLRN LSLSGNNFSG EIPESMGGLI
160 170 180 190 200
SLQSLDMSSN SLSGPLPKSL TRLNDLLYLN LSSNGFTGKM PRGFELISSL
210 220 230 240 250
EVLDLHGNSI DGNLDGEFFL LTNASYVDIS GNRLVTTSGK LLPGVSESIK
260 270 280 290 300
HLNLSHNQLE GSLTSGFQLF QNLKVLDLSY NMLSGELPGF NYVYDLEVLK
310 320 330 340 350
LSNNRFSGSL PNNLLKGDSL LLTTLDLSGN NLSGPVSSIM STTLHTLDLS
360 370 380 390 400
SNSLTGELPL LTGGCVLLDL SNNQFEGNLT RWSKWENIEY LDLSQNHFTG
410 420 430 440 450
SFPDATPQLL RANHLNLSYN KLTGSLPERI PTHYPKLRVL DISSNSLEGP
460 470 480 490 500
IPGALLSMPT LEEIHLQNNG MTGNIGPLPS SGSRIRLLDL SHNRFDGDLP
510 520 530 540 550
GVFGSLTNLQ VLNLAANNLS GSLPSSMNDI VSLSSLDVSQ NHFTGPLPSN
560 570 580 590 600
LSSNIMAFNV SYNDLSGTVP ENLKNFPPPS FYPGNSKLVL PAGSPGSSAS
610 620 630 640 650
EASKNKSTNK LVKVVIIVSC AVALIILILV AILLFCICKS RRREERSITG
660 670 680 690 700
KETNRRAQTI PSGSGGGMVV SAEDLVASRK GSSSEILSPD EKLAVATGFS
710 720 730 740 750
PSKTSNLSWS PGSGDSFPAD QQLARLDVRS PDRLVGELHF LDDSIKLTPE
760 770 780 790 800
ELSRAPAEVL GRSSHGTSYR ATLDNGVFLT VKWLREGVAK QRKEFAKEVK
810 820 830 840 850
KFSNIRHPNV VTLRGYYWGP TQHEKLILSD YISPGSLASF LYDRPGRKGP
860 870 880 890 900
PLAWTQRLKI AVDVARGLNY LHFDRAVPHG NLKATNILLD GAELNARVAD
910 920 930 940 950
YCLHRLMTQA GTVEQILDAG ILGYRAPELA ASRKPLPSFK SDVYAFGVIL
960 970 980 990 1000
LEILTGRCAG DVITGEQEGV DLTDWVRLRV AEGRGAECFD SVLTQEMGSD
1010 1020 1030
PVTEKGMKEV LGIALRCIRS VSERPGIKTI YEDLSSI
Length:1,037
Mass (Da):112,042
Last modified:May 5, 2009 - v1
Checksum:i20E81BFD1A605F7C
GO

Sequence cautioni

The sequence AEE84378.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence CAB45889.1 differs from that shown. Reason: Erroneous gene model prediction. Curated
The sequence CAB79094.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL080282 Genomic DNA. Translation: CAB45889.1. Sequence problems.
AL161554 Genomic DNA. Translation: CAB79094.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84378.1. Sequence problems.
FJ708750 mRNA. Translation: ACN59344.1.
PIRiT10636.
RefSeqiNP_193826.2. NM_118212.2.
UniGeneiAt.32683.
At.75578.

Genome annotation databases

GeneIDi827842.
KEGGiath:AT4G20940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL080282 Genomic DNA. Translation: CAB45889.1 . Sequence problems.
AL161554 Genomic DNA. Translation: CAB79094.1 . Sequence problems.
CP002687 Genomic DNA. Translation: AEE84378.1 . Sequence problems.
FJ708750 mRNA. Translation: ACN59344.1 .
PIRi T10636.
RefSeqi NP_193826.2. NM_118212.2.
UniGenei At.32683.
At.75578.

3D structure databases

ProteinModelPortali C0LGQ9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT4G20940.1-P.

Proteomic databases

PaxDbi C0LGQ9.
PRIDEi C0LGQ9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 827842.
KEGGi ath:AT4G20940.

Organism-specific databases

GeneFarmi 2329. 47.
TAIRi AT4G20940.

Phylogenomic databases

eggNOGi NOG256848.
InParanoidi C0LGQ9.
PhylomeDBi C0LGQ9.

Enzyme and pathway databases

BioCyci ARA:AT4G20940-MONOMER.

Family and domain databases

InterProi IPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
[Graphical view ]
Pfami PF00560. LRR_1. 8 hits.
PF13855. LRR_8. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view ]
SUPFAMi SSF56112. SSF56112. 1 hit.
PROSITEi PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana."
    Gou X., He K., Yang H., Yuan T., Lin H., Clouse S.D., Li J.
    BMC Genomics 11:19-19(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
    Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
    Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-688, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiY4294_ARATH
AccessioniPrimary (citable) accession number: C0LGQ9
Secondary accession number(s): F4JIJ5, Q9SUB9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: May 5, 2009
Last modified: November 26, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3