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Protein

Probable LRR receptor-like serine/threonine-protein kinase At4g20940

Gene

At4g20940

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei782ATPPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi760 – 768ATPPROSITE-ProRule annotation9

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Kinase, Receptor, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At4g20940 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At4g20940
ORF Names:T13K14.100
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G20940.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini2 – 614ExtracellularSequence analysisAdd BLAST613
Transmembranei615 – 635HelicalSequence analysisAdd BLAST21
Topological domaini636 – 1037CytoplasmicSequence analysisAdd BLAST402

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedSequence analysis
ChainiPRO_00003875552 – 1037Probable LRR receptor-like serine/threonine-protein kinase At4g20940Add BLAST1036

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi2N-myristoyl glycineSequence analysis1
Glycosylationi76N-linked (GlcNAc...)Sequence analysis1
Glycosylationi87N-linked (GlcNAc...)Sequence analysis1
Glycosylationi130N-linked (GlcNAc...)Sequence analysis1
Glycosylationi137N-linked (GlcNAc...)Sequence analysis1
Glycosylationi180N-linked (GlcNAc...)Sequence analysis1
Glycosylationi223N-linked (GlcNAc...)Sequence analysis1
Glycosylationi253N-linked (GlcNAc...)Sequence analysis1
Glycosylationi331N-linked (GlcNAc...)Sequence analysis1
Glycosylationi378N-linked (GlcNAc...)Sequence analysis1
Glycosylationi416N-linked (GlcNAc...)Sequence analysis1
Glycosylationi518N-linked (GlcNAc...)Sequence analysis1
Glycosylationi550N-linked (GlcNAc...)Sequence analysis1
Glycosylationi559N-linked (GlcNAc...)Sequence analysis1
Glycosylationi605N-linked (GlcNAc...)Sequence analysis1
Modified residuei688PhosphoserineCombined sources1

Keywords - PTMi

Glycoprotein, Lipoprotein, Myristate, Phosphoprotein

Proteomic databases

PaxDbiC0LGQ9.
PRIDEiC0LGQ9.

PTM databases

iPTMnetiC0LGQ9.

Interactioni

Protein-protein interaction databases

BioGridi13133. 13 interactors.
STRINGi3702.AT4G20940.1.

Structurei

3D structure databases

ProteinModelPortaliC0LGQ9.
SMRiC0LGQ9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati57 – 77LRR 1Add BLAST21
Repeati78 – 103LRR 2Add BLAST26
Repeati105 – 125LRR 3Add BLAST21
Repeati126 – 149LRR 4Add BLAST24
Repeati150 – 173LRR 5Add BLAST24
Repeati175 – 196LRR 6Add BLAST22
Repeati197 – 221LRR 7Add BLAST25
Repeati223 – 244LRR 8Add BLAST22
Repeati246 – 269LRR 9Add BLAST24
Repeati270 – 293LRR 10Add BLAST24
Repeati294 – 317LRR 11Add BLAST24
Repeati319 – 341LRR 12Add BLAST23
Repeati342 – 368LRR 13Add BLAST27
Repeati385 – 409LRR 14Add BLAST25
Repeati410 – 433LRR 15Add BLAST24
Repeati434 – 458LRR 16Add BLAST25
Repeati460 – 482LRR 17Add BLAST23
Repeati483 – 505LRR 18Add BLAST23
Repeati506 – 530LRR 19Add BLAST25
Repeati532 – 554LRR 20Add BLAST23
Repeati556 – 576LRR 21Add BLAST21
Domaini754 – 1037Protein kinasePROSITE-ProRule annotationAdd BLAST284

Domaini

The protein kinase domain is predicted to be catalytically inactive.

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
Contains 21 LRR (leucine-rich) repeats.Curated
Contains 1 protein kinase domain.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410ITA6. Eukaryota.
COG4886. LUCA.
InParanoidiC0LGQ9.
PhylomeDBiC0LGQ9.

Family and domain databases

Gene3Di3.80.10.10. 2 hits.
InterProiIPR011009. Kinase-like_dom.
IPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
IPR000719. Prot_kinase_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
[Graphical view]
PfamiPF13516. LRR_6. 2 hits.
PF13855. LRR_8. 3 hits.
PF08263. LRRNT_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 8 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0LGQ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQLPSQDIM ALLEFKKGIK HDPTGFVLNS WNDESIDFNG CPSSWNGIVC
60 70 80 90 100
NGGNVAGVVL DNLGLTADAD FSLFSNLTKL VKLSMSNNSL SGVLPNDLGS
110 120 130 140 150
FKSLQFLDLS DNLFSSSLPK EIGRSVSLRN LSLSGNNFSG EIPESMGGLI
160 170 180 190 200
SLQSLDMSSN SLSGPLPKSL TRLNDLLYLN LSSNGFTGKM PRGFELISSL
210 220 230 240 250
EVLDLHGNSI DGNLDGEFFL LTNASYVDIS GNRLVTTSGK LLPGVSESIK
260 270 280 290 300
HLNLSHNQLE GSLTSGFQLF QNLKVLDLSY NMLSGELPGF NYVYDLEVLK
310 320 330 340 350
LSNNRFSGSL PNNLLKGDSL LLTTLDLSGN NLSGPVSSIM STTLHTLDLS
360 370 380 390 400
SNSLTGELPL LTGGCVLLDL SNNQFEGNLT RWSKWENIEY LDLSQNHFTG
410 420 430 440 450
SFPDATPQLL RANHLNLSYN KLTGSLPERI PTHYPKLRVL DISSNSLEGP
460 470 480 490 500
IPGALLSMPT LEEIHLQNNG MTGNIGPLPS SGSRIRLLDL SHNRFDGDLP
510 520 530 540 550
GVFGSLTNLQ VLNLAANNLS GSLPSSMNDI VSLSSLDVSQ NHFTGPLPSN
560 570 580 590 600
LSSNIMAFNV SYNDLSGTVP ENLKNFPPPS FYPGNSKLVL PAGSPGSSAS
610 620 630 640 650
EASKNKSTNK LVKVVIIVSC AVALIILILV AILLFCICKS RRREERSITG
660 670 680 690 700
KETNRRAQTI PSGSGGGMVV SAEDLVASRK GSSSEILSPD EKLAVATGFS
710 720 730 740 750
PSKTSNLSWS PGSGDSFPAD QQLARLDVRS PDRLVGELHF LDDSIKLTPE
760 770 780 790 800
ELSRAPAEVL GRSSHGTSYR ATLDNGVFLT VKWLREGVAK QRKEFAKEVK
810 820 830 840 850
KFSNIRHPNV VTLRGYYWGP TQHEKLILSD YISPGSLASF LYDRPGRKGP
860 870 880 890 900
PLAWTQRLKI AVDVARGLNY LHFDRAVPHG NLKATNILLD GAELNARVAD
910 920 930 940 950
YCLHRLMTQA GTVEQILDAG ILGYRAPELA ASRKPLPSFK SDVYAFGVIL
960 970 980 990 1000
LEILTGRCAG DVITGEQEGV DLTDWVRLRV AEGRGAECFD SVLTQEMGSD
1010 1020 1030
PVTEKGMKEV LGIALRCIRS VSERPGIKTI YEDLSSI
Length:1,037
Mass (Da):112,042
Last modified:May 5, 2009 - v1
Checksum:i20E81BFD1A605F7C
GO

Sequence cautioni

The sequence AEE84378 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence CAB45889 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence CAB79094 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL080282 Genomic DNA. Translation: CAB45889.1. Sequence problems.
AL161554 Genomic DNA. Translation: CAB79094.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84378.1. Sequence problems.
FJ708750 mRNA. Translation: ACN59344.1.
PIRiT10636.
UniGeneiAt.32683.
At.75578.

Genome annotation databases

KEGGiath:AT4G20940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL080282 Genomic DNA. Translation: CAB45889.1. Sequence problems.
AL161554 Genomic DNA. Translation: CAB79094.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84378.1. Sequence problems.
FJ708750 mRNA. Translation: ACN59344.1.
PIRiT10636.
UniGeneiAt.32683.
At.75578.

3D structure databases

ProteinModelPortaliC0LGQ9.
SMRiC0LGQ9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi13133. 13 interactors.
STRINGi3702.AT4G20940.1.

PTM databases

iPTMnetiC0LGQ9.

Proteomic databases

PaxDbiC0LGQ9.
PRIDEiC0LGQ9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGiath:AT4G20940.

Organism-specific databases

TAIRiAT4G20940.

Phylogenomic databases

eggNOGiENOG410ITA6. Eukaryota.
COG4886. LUCA.
InParanoidiC0LGQ9.
PhylomeDBiC0LGQ9.

Miscellaneous databases

PROiC0LGQ9.

Family and domain databases

Gene3Di3.80.10.10. 2 hits.
InterProiIPR011009. Kinase-like_dom.
IPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR003591. Leu-rich_rpt_typical-subtyp.
IPR013210. LRR_N_plant-typ.
IPR000719. Prot_kinase_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
[Graphical view]
PfamiPF13516. LRR_6. 2 hits.
PF13855. LRR_8. 3 hits.
PF08263. LRRNT_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
SMARTiSM00369. LRR_TYP. 8 hits.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY4294_ARATH
AccessioniPrimary (citable) accession number: C0LGQ9
Secondary accession number(s): F4JIJ5, Q9SUB9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: May 5, 2009
Last modified: November 30, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.