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C0LGQ9

- Y4294_ARATH

UniProt

C0LGQ9 - Y4294_ARATH

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Protein
Probable LRR receptor-like serine/threonine-protein kinase At4g20940
Gene
At4g20940, T13K14.100
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei782 – 7821ATP By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi760 – 7689ATP By similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. protein serine/threonine kinase activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    Kinase, Receptor, Serine/threonine-protein kinase, Transferase

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciARA:AT4G20940-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable LRR receptor-like serine/threonine-protein kinase At4g20940 (EC:2.7.11.1)
    Gene namesi
    Ordered Locus Names:At4g20940
    ORF Names:T13K14.100
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 4

    Organism-specific databases

    TAIRiAT4G20940.

    Subcellular locationi

    Topology

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini2 – 614613Extracellular Reviewed prediction
    Add
    BLAST
    Transmembranei615 – 63521Helical; Reviewed prediction
    Add
    BLAST
    Topological domaini636 – 1037402Cytoplasmic Reviewed prediction
    Add
    BLAST

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell
    Complete GO annotation...

    Keywords - Cellular componenti

    Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed Reviewed prediction
    Chaini2 – 10371036Probable LRR receptor-like serine/threonine-protein kinase At4g20940
    PRO_0000387555Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Lipidationi2 – 21N-myristoyl glycine Reviewed prediction
    Glycosylationi76 – 761N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi87 – 871N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi130 – 1301N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi137 – 1371N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi180 – 1801N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi223 – 2231N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi253 – 2531N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi331 – 3311N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi378 – 3781N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi416 – 4161N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi518 – 5181N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi550 – 5501N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi559 – 5591N-linked (GlcNAc...) Reviewed prediction
    Glycosylationi605 – 6051N-linked (GlcNAc...) Reviewed prediction
    Modified residuei688 – 6881Phosphoserine1 Publication

    Keywords - PTMi

    Glycoprotein, Lipoprotein, Myristate, Phosphoprotein

    Proteomic databases

    PaxDbiC0LGQ9.
    PRIDEiC0LGQ9.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT4G20940.1-P.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Repeati57 – 7721LRR 1
    Add
    BLAST
    Repeati78 – 10326LRR 2
    Add
    BLAST
    Repeati105 – 12521LRR 3
    Add
    BLAST
    Repeati126 – 14924LRR 4
    Add
    BLAST
    Repeati150 – 17324LRR 5
    Add
    BLAST
    Repeati175 – 19622LRR 6
    Add
    BLAST
    Repeati197 – 22125LRR 7
    Add
    BLAST
    Repeati223 – 24422LRR 8
    Add
    BLAST
    Repeati246 – 26924LRR 9
    Add
    BLAST
    Repeati270 – 29324LRR 10
    Add
    BLAST
    Repeati294 – 31724LRR 11
    Add
    BLAST
    Repeati319 – 34123LRR 12
    Add
    BLAST
    Repeati342 – 36827LRR 13
    Add
    BLAST
    Repeati385 – 40925LRR 14
    Add
    BLAST
    Repeati410 – 43324LRR 15
    Add
    BLAST
    Repeati434 – 45825LRR 16
    Add
    BLAST
    Repeati460 – 48223LRR 17
    Add
    BLAST
    Repeati483 – 50523LRR 18
    Add
    BLAST
    Repeati506 – 53025LRR 19
    Add
    BLAST
    Repeati532 – 55423LRR 20
    Add
    BLAST
    Repeati556 – 57621LRR 21
    Add
    BLAST
    Domaini754 – 1037284Protein kinase
    Add
    BLAST

    Domaini

    The protein kinase domain is predicted to be catalytically inactive.

    Sequence similaritiesi

    Keywords - Domaini

    Leucine-rich repeat, Repeat, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG256848.
    InParanoidiQ9SUB9.
    PhylomeDBiC0LGQ9.

    Family and domain databases

    InterProiIPR011009. Kinase-like_dom.
    IPR001611. Leu-rich_rpt.
    IPR013210. LRR-contain_N2.
    IPR000719. Prot_kinase_dom.
    IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
    [Graphical view]
    PfamiPF00560. LRR_1. 8 hits.
    PF13855. LRR_8. 2 hits.
    PF08263. LRRNT_2. 1 hit.
    PF07714. Pkinase_Tyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF56112. SSF56112. 1 hit.
    PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C0LGQ9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGQLPSQDIM ALLEFKKGIK HDPTGFVLNS WNDESIDFNG CPSSWNGIVC     50
    NGGNVAGVVL DNLGLTADAD FSLFSNLTKL VKLSMSNNSL SGVLPNDLGS 100
    FKSLQFLDLS DNLFSSSLPK EIGRSVSLRN LSLSGNNFSG EIPESMGGLI 150
    SLQSLDMSSN SLSGPLPKSL TRLNDLLYLN LSSNGFTGKM PRGFELISSL 200
    EVLDLHGNSI DGNLDGEFFL LTNASYVDIS GNRLVTTSGK LLPGVSESIK 250
    HLNLSHNQLE GSLTSGFQLF QNLKVLDLSY NMLSGELPGF NYVYDLEVLK 300
    LSNNRFSGSL PNNLLKGDSL LLTTLDLSGN NLSGPVSSIM STTLHTLDLS 350
    SNSLTGELPL LTGGCVLLDL SNNQFEGNLT RWSKWENIEY LDLSQNHFTG 400
    SFPDATPQLL RANHLNLSYN KLTGSLPERI PTHYPKLRVL DISSNSLEGP 450
    IPGALLSMPT LEEIHLQNNG MTGNIGPLPS SGSRIRLLDL SHNRFDGDLP 500
    GVFGSLTNLQ VLNLAANNLS GSLPSSMNDI VSLSSLDVSQ NHFTGPLPSN 550
    LSSNIMAFNV SYNDLSGTVP ENLKNFPPPS FYPGNSKLVL PAGSPGSSAS 600
    EASKNKSTNK LVKVVIIVSC AVALIILILV AILLFCICKS RRREERSITG 650
    KETNRRAQTI PSGSGGGMVV SAEDLVASRK GSSSEILSPD EKLAVATGFS 700
    PSKTSNLSWS PGSGDSFPAD QQLARLDVRS PDRLVGELHF LDDSIKLTPE 750
    ELSRAPAEVL GRSSHGTSYR ATLDNGVFLT VKWLREGVAK QRKEFAKEVK 800
    KFSNIRHPNV VTLRGYYWGP TQHEKLILSD YISPGSLASF LYDRPGRKGP 850
    PLAWTQRLKI AVDVARGLNY LHFDRAVPHG NLKATNILLD GAELNARVAD 900
    YCLHRLMTQA GTVEQILDAG ILGYRAPELA ASRKPLPSFK SDVYAFGVIL 950
    LEILTGRCAG DVITGEQEGV DLTDWVRLRV AEGRGAECFD SVLTQEMGSD 1000
    PVTEKGMKEV LGIALRCIRS VSERPGIKTI YEDLSSI 1037
    Length:1,037
    Mass (Da):112,042
    Last modified:May 5, 2009 - v1
    Checksum:i20E81BFD1A605F7C
    GO

    Sequence cautioni

    The sequence AEE84378.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence CAB45889.1 differs from that shown. Reason: Erroneous gene model prediction.
    The sequence CAB79094.1 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL080282 Genomic DNA. Translation: CAB45889.1. Sequence problems.
    AL161554 Genomic DNA. Translation: CAB79094.1. Sequence problems.
    CP002687 Genomic DNA. Translation: AEE84378.1. Sequence problems.
    FJ708750 mRNA. Translation: ACN59344.1.
    PIRiT10636.
    RefSeqiNP_193826.2. NM_118212.2.
    UniGeneiAt.32683.
    At.75578.

    Genome annotation databases

    GeneIDi827842.
    KEGGiath:AT4G20940.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL080282 Genomic DNA. Translation: CAB45889.1 . Sequence problems.
    AL161554 Genomic DNA. Translation: CAB79094.1 . Sequence problems.
    CP002687 Genomic DNA. Translation: AEE84378.1 . Sequence problems.
    FJ708750 mRNA. Translation: ACN59344.1 .
    PIRi T10636.
    RefSeqi NP_193826.2. NM_118212.2.
    UniGenei At.32683.
    At.75578.

    3D structure databases

    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 3702.AT4G20940.1-P.

    Proteomic databases

    PaxDbi C0LGQ9.
    PRIDEi C0LGQ9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 827842.
    KEGGi ath:AT4G20940.

    Organism-specific databases

    GeneFarmi 2329. 47.
    TAIRi AT4G20940.

    Phylogenomic databases

    eggNOGi NOG256848.
    InParanoidi Q9SUB9.
    PhylomeDBi C0LGQ9.

    Enzyme and pathway databases

    BioCyci ARA:AT4G20940-MONOMER.

    Family and domain databases

    InterProi IPR011009. Kinase-like_dom.
    IPR001611. Leu-rich_rpt.
    IPR013210. LRR-contain_N2.
    IPR000719. Prot_kinase_dom.
    IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
    [Graphical view ]
    Pfami PF00560. LRR_1. 8 hits.
    PF13855. LRR_8. 2 hits.
    PF08263. LRRNT_2. 1 hit.
    PF07714. Pkinase_Tyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56112. SSF56112. 1 hit.
    PROSITEi PS50011. PROTEIN_KINASE_DOM. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
      Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
      , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
      Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana."
      Gou X., He K., Yang H., Yuan T., Lin H., Clouse S.D., Li J.
      BMC Genomics 11:19-19(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    4. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
      Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
      Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-688, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

    Entry informationi

    Entry nameiY4294_ARATH
    AccessioniPrimary (citable) accession number: C0LGQ9
    Secondary accession number(s): F4JIJ5, Q9SUB9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 3, 2009
    Last sequence update: May 5, 2009
    Last modified: May 14, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3

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