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C0LGQ9

- Y4294_ARATH

UniProt

C0LGQ9 - Y4294_ARATH

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Protein

Probable LRR receptor-like serine/threonine-protein kinase At4g20940

Gene
At4g20940, T13K14.100
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei782 – 7821ATP By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi760 – 7689ATP By similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. protein serine/threonine kinase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Receptor, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT4G20940-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At4g20940 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At4g20940
ORF Names:T13K14.100
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 4

Organism-specific databases

TAIRiAT4G20940.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini2 – 614613Extracellular Reviewed predictionAdd
BLAST
Transmembranei615 – 63521Helical; Reviewed predictionAdd
BLAST
Topological domaini636 – 1037402Cytoplasmic Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed Reviewed prediction
Chaini2 – 10371036Probable LRR receptor-like serine/threonine-protein kinase At4g20940PRO_0000387555Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi2 – 21N-myristoyl glycine Reviewed prediction
Glycosylationi76 – 761N-linked (GlcNAc...) Reviewed prediction
Glycosylationi87 – 871N-linked (GlcNAc...) Reviewed prediction
Glycosylationi130 – 1301N-linked (GlcNAc...) Reviewed prediction
Glycosylationi137 – 1371N-linked (GlcNAc...) Reviewed prediction
Glycosylationi180 – 1801N-linked (GlcNAc...) Reviewed prediction
Glycosylationi223 – 2231N-linked (GlcNAc...) Reviewed prediction
Glycosylationi253 – 2531N-linked (GlcNAc...) Reviewed prediction
Glycosylationi331 – 3311N-linked (GlcNAc...) Reviewed prediction
Glycosylationi378 – 3781N-linked (GlcNAc...) Reviewed prediction
Glycosylationi416 – 4161N-linked (GlcNAc...) Reviewed prediction
Glycosylationi518 – 5181N-linked (GlcNAc...) Reviewed prediction
Glycosylationi550 – 5501N-linked (GlcNAc...) Reviewed prediction
Glycosylationi559 – 5591N-linked (GlcNAc...) Reviewed prediction
Glycosylationi605 – 6051N-linked (GlcNAc...) Reviewed prediction
Modified residuei688 – 6881Phosphoserine1 Publication

Keywords - PTMi

Glycoprotein, Lipoprotein, Myristate, Phosphoprotein

Proteomic databases

PaxDbiC0LGQ9.
PRIDEiC0LGQ9.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G20940.1-P.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati57 – 7721LRR 1Add
BLAST
Repeati78 – 10326LRR 2Add
BLAST
Repeati105 – 12521LRR 3Add
BLAST
Repeati126 – 14924LRR 4Add
BLAST
Repeati150 – 17324LRR 5Add
BLAST
Repeati175 – 19622LRR 6Add
BLAST
Repeati197 – 22125LRR 7Add
BLAST
Repeati223 – 24422LRR 8Add
BLAST
Repeati246 – 26924LRR 9Add
BLAST
Repeati270 – 29324LRR 10Add
BLAST
Repeati294 – 31724LRR 11Add
BLAST
Repeati319 – 34123LRR 12Add
BLAST
Repeati342 – 36827LRR 13Add
BLAST
Repeati385 – 40925LRR 14Add
BLAST
Repeati410 – 43324LRR 15Add
BLAST
Repeati434 – 45825LRR 16Add
BLAST
Repeati460 – 48223LRR 17Add
BLAST
Repeati483 – 50523LRR 18Add
BLAST
Repeati506 – 53025LRR 19Add
BLAST
Repeati532 – 55423LRR 20Add
BLAST
Repeati556 – 57621LRR 21Add
BLAST
Domaini754 – 1037284Protein kinaseAdd
BLAST

Domaini

The protein kinase domain is predicted to be catalytically inactive.

Sequence similaritiesi

Keywords - Domaini

Leucine-rich repeat, Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG256848.
InParanoidiQ9SUB9.
PhylomeDBiC0LGQ9.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
[Graphical view]
PfamiPF00560. LRR_1. 8 hits.
PF13855. LRR_8. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0LGQ9-1 [UniParc]FASTAAdd to Basket

« Hide

MGQLPSQDIM ALLEFKKGIK HDPTGFVLNS WNDESIDFNG CPSSWNGIVC     50
NGGNVAGVVL DNLGLTADAD FSLFSNLTKL VKLSMSNNSL SGVLPNDLGS 100
FKSLQFLDLS DNLFSSSLPK EIGRSVSLRN LSLSGNNFSG EIPESMGGLI 150
SLQSLDMSSN SLSGPLPKSL TRLNDLLYLN LSSNGFTGKM PRGFELISSL 200
EVLDLHGNSI DGNLDGEFFL LTNASYVDIS GNRLVTTSGK LLPGVSESIK 250
HLNLSHNQLE GSLTSGFQLF QNLKVLDLSY NMLSGELPGF NYVYDLEVLK 300
LSNNRFSGSL PNNLLKGDSL LLTTLDLSGN NLSGPVSSIM STTLHTLDLS 350
SNSLTGELPL LTGGCVLLDL SNNQFEGNLT RWSKWENIEY LDLSQNHFTG 400
SFPDATPQLL RANHLNLSYN KLTGSLPERI PTHYPKLRVL DISSNSLEGP 450
IPGALLSMPT LEEIHLQNNG MTGNIGPLPS SGSRIRLLDL SHNRFDGDLP 500
GVFGSLTNLQ VLNLAANNLS GSLPSSMNDI VSLSSLDVSQ NHFTGPLPSN 550
LSSNIMAFNV SYNDLSGTVP ENLKNFPPPS FYPGNSKLVL PAGSPGSSAS 600
EASKNKSTNK LVKVVIIVSC AVALIILILV AILLFCICKS RRREERSITG 650
KETNRRAQTI PSGSGGGMVV SAEDLVASRK GSSSEILSPD EKLAVATGFS 700
PSKTSNLSWS PGSGDSFPAD QQLARLDVRS PDRLVGELHF LDDSIKLTPE 750
ELSRAPAEVL GRSSHGTSYR ATLDNGVFLT VKWLREGVAK QRKEFAKEVK 800
KFSNIRHPNV VTLRGYYWGP TQHEKLILSD YISPGSLASF LYDRPGRKGP 850
PLAWTQRLKI AVDVARGLNY LHFDRAVPHG NLKATNILLD GAELNARVAD 900
YCLHRLMTQA GTVEQILDAG ILGYRAPELA ASRKPLPSFK SDVYAFGVIL 950
LEILTGRCAG DVITGEQEGV DLTDWVRLRV AEGRGAECFD SVLTQEMGSD 1000
PVTEKGMKEV LGIALRCIRS VSERPGIKTI YEDLSSI 1037
Length:1,037
Mass (Da):112,042
Last modified:May 5, 2009 - v1
Checksum:i20E81BFD1A605F7C
GO

Sequence cautioni

The sequence AEE84378.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAB45889.1 differs from that shown. Reason: Erroneous gene model prediction.
The sequence CAB79094.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL080282 Genomic DNA. Translation: CAB45889.1. Sequence problems.
AL161554 Genomic DNA. Translation: CAB79094.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE84378.1. Sequence problems.
FJ708750 mRNA. Translation: ACN59344.1.
PIRiT10636.
RefSeqiNP_193826.2. NM_118212.2.
UniGeneiAt.32683.
At.75578.

Genome annotation databases

GeneIDi827842.
KEGGiath:AT4G20940.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL080282 Genomic DNA. Translation: CAB45889.1 . Sequence problems.
AL161554 Genomic DNA. Translation: CAB79094.1 . Sequence problems.
CP002687 Genomic DNA. Translation: AEE84378.1 . Sequence problems.
FJ708750 mRNA. Translation: ACN59344.1 .
PIRi T10636.
RefSeqi NP_193826.2. NM_118212.2.
UniGenei At.32683.
At.75578.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT4G20940.1-P.

Proteomic databases

PaxDbi C0LGQ9.
PRIDEi C0LGQ9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 827842.
KEGGi ath:AT4G20940.

Organism-specific databases

GeneFarmi 2329. 47.
TAIRi AT4G20940.

Phylogenomic databases

eggNOGi NOG256848.
InParanoidi Q9SUB9.
PhylomeDBi C0LGQ9.

Enzyme and pathway databases

BioCyci ARA:AT4G20940-MONOMER.

Family and domain databases

InterProi IPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
[Graphical view ]
Pfami PF00560. LRR_1. 8 hits.
PF13855. LRR_8. 2 hits.
PF08263. LRRNT_2. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view ]
SUPFAMi SSF56112. SSF56112. 1 hit.
PROSITEi PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana."
    Gou X., He K., Yang H., Yuan T., Lin H., Clouse S.D., Li J.
    BMC Genomics 11:19-19(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks."
    Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.
    Plant Physiol. 150:889-903(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-688, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiY4294_ARATH
AccessioniPrimary (citable) accession number: C0LGQ9
Secondary accession number(s): F4JIJ5, Q9SUB9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: May 5, 2009
Last modified: May 14, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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