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C0LGP4

- Y3475_ARATH

UniProt

C0LGP4 - Y3475_ARATH

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Protein

Probable LRR receptor-like serine/threonine-protein kinase At3g47570

Gene

At3g47570

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei731 – 7311ATPPROSITE-ProRule annotation
Active sitei839 – 8391Proton acceptorPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi708 – 7169ATPPROSITE-ProRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. protein serine/threonine kinase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Receptor, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT3G47570-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At3g47570
ORF Names:F1P2.120
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G47570.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini20 – 645626ExtracellularSequence AnalysisAdd
BLAST
Transmembranei646 – 66621HelicalSequence AnalysisAdd
BLAST
Topological domaini667 – 1010344CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence AnalysisAdd
BLAST
Chaini20 – 1010991Probable LRR receptor-like serine/threonine-protein kinase At3g47570PRO_0000387551Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi48 – 481N-linked (GlcNAc...)Sequence Analysis
Glycosylationi88 – 881N-linked (GlcNAc...)Sequence Analysis
Glycosylationi136 – 1361N-linked (GlcNAc...)Sequence Analysis
Glycosylationi184 – 1841N-linked (GlcNAc...)Sequence Analysis
Glycosylationi221 – 2211N-linked (GlcNAc...)Sequence Analysis
Glycosylationi232 – 2321N-linked (GlcNAc...)Sequence Analysis
Glycosylationi281 – 2811N-linked (GlcNAc...)Sequence Analysis
Glycosylationi294 – 2941N-linked (GlcNAc...)Sequence Analysis
Glycosylationi334 – 3341N-linked (GlcNAc...)Sequence Analysis
Glycosylationi358 – 3581N-linked (GlcNAc...)Sequence Analysis
Glycosylationi431 – 4311N-linked (GlcNAc...)Sequence Analysis
Glycosylationi455 – 4551N-linked (GlcNAc...)Sequence Analysis
Glycosylationi470 – 4701N-linked (GlcNAc...)Sequence Analysis
Glycosylationi582 – 5821N-linked (GlcNAc...)Sequence Analysis
Glycosylationi600 – 6001N-linked (GlcNAc...)Sequence Analysis
Modified residuei699 – 6991PhosphothreonineBy similarity
Modified residuei781 – 7811PhosphotyrosineBy similarity

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiC0LGP4.
PRIDEiC0LGP4.

Structurei

3D structure databases

ProteinModelPortaliC0LGP4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati89 – 11325LRR 1Add
BLAST
Repeati114 – 13724LRR 2Add
BLAST
Repeati139 – 16123LRR 3Add
BLAST
Repeati162 – 18524LRR 4Add
BLAST
Repeati186 – 20924LRR 5Add
BLAST
Repeati211 – 23323LRR 6Add
BLAST
Repeati234 – 25825LRR 7Add
BLAST
Repeati259 – 28224LRR 8Add
BLAST
Repeati283 – 30725LRR 9Add
BLAST
Repeati310 – 33324LRR 10Add
BLAST
Repeati335 – 35925LRR 11Add
BLAST
Repeati361 – 38424LRR 12Add
BLAST
Repeati385 – 40824LRR 13Add
BLAST
Repeati410 – 43223LRR 14Add
BLAST
Repeati433 – 45523LRR 15Add
BLAST
Repeati457 – 48024LRR 16Add
BLAST
Repeati481 – 50424LRR 17Add
BLAST
Repeati505 – 52824LRR 18Add
BLAST
Repeati530 – 55122LRR 19Add
BLAST
Repeati552 – 57423LRR 20Add
BLAST
Repeati575 – 60026LRR 21Add
BLAST
Domaini702 – 1002301Protein kinasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
Contains 21 LRR (leucine-rich) repeats.Curated
Contains 1 protein kinase domain.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG4886.
HOGENOMiHOG000116551.
InParanoidiC0LGP4.
OMAiTAETENC.
PhylomeDBiC0LGP4.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR025875. Leu-rich_rpt_4.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF00560. LRR_1. 1 hit.
PF12799. LRR_4. 1 hit.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C0LGP4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRLFLLLAFN ALMLLETHGF TDETDRQALL QFKSQVSEDK RVVLSSWNHS
60 70 80 90 100
FPLCNWKGVT CGRKNKRVTH LELGRLQLGG VISPSIGNLS FLVSLDLYEN
110 120 130 140 150
FFGGTIPQEV GQLSRLEYLD MGINYLRGPI PLGLYNCSRL LNLRLDSNRL
160 170 180 190 200
GGSVPSELGS LTNLVQLNLY GNNMRGKLPT SLGNLTLLEQ LALSHNNLEG
210 220 230 240 250
EIPSDVAQLT QIWSLQLVAN NFSGVFPPAL YNLSSLKLLG IGYNHFSGRL
260 270 280 290 300
RPDLGILLPN LLSFNMGGNY FTGSIPTTLS NISTLERLGM NENNLTGSIP
310 320 330 340 350
TFGNVPNLKL LFLHTNSLGS DSSRDLEFLT SLTNCTQLET LGIGRNRLGG
360 370 380 390 400
DLPISIANLS AKLVTLDLGG TLISGSIPYD IGNLINLQKL ILDQNMLSGP
410 420 430 440 450
LPTSLGKLLN LRYLSLFSNR LSGGIPAFIG NMTMLETLDL SNNGFEGIVP
460 470 480 490 500
TSLGNCSHLL ELWIGDNKLN GTIPLEIMKI QQLLRLDMSG NSLIGSLPQD
510 520 530 540 550
IGALQNLGTL SLGDNKLSGK LPQTLGNCLT MESLFLEGNL FYGDIPDLKG
560 570 580 590 600
LVGVKEVDLS NNDLSGSIPE YFASFSKLEY LNLSFNNLEG KVPVKGIFEN
610 620 630 640 650
ATTVSIVGNN DLCGGIMGFQ LKPCLSQAPS VVKKHSSRLK KVVIGVSVGI
660 670 680 690 700
TLLLLLFMAS VTLIWLRKRK KNKETNNPTP STLEVLHEKI SYGDLRNATN
710 720 730 740 750
GFSSSNMVGS GSFGTVYKAL LLTEKKVVAV KVLNMQRRGA MKSFMAECES
760 770 780 790 800
LKDIRHRNLV KLLTACSSID FQGNEFRALI YEFMPNGSLD MWLHPEEVEE
810 820 830 840 850
IHRPSRTLTL LERLNIAIDV ASVLDYLHVH CHEPIAHCDL KPSNVLLDDD
860 870 880 890 900
LTAHVSDFGL ARLLLKFDEE SFFNQLSSAG VRGTIGYAAP EYGVGGQPSI
910 920 930 940 950
NGDVYSFGIL LLEMFTGKRP TNELFGGNFT LNSYTKSALP ERILDIVDES
960 970 980 990 1000
ILHIGLRVGF PVVECLTMVF EVGLRCCEES PMNRLATSIV VKELISIRER
1010
FFKASRTTWR
Length:1,010
Mass (Da):110,901
Last modified:May 5, 2009 - v1
Checksum:i5B06436E11E9F879
GO

Sequence cautioni

The sequence CAB61983.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti995 – 9951I → V in AAL36369. (PubMed:14593172)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL132955 Genomic DNA. Translation: CAB61983.1. Sequence problems.
CP002686 Genomic DNA. Translation: AEE78303.1.
AY064013 mRNA. Translation: AAL36369.1.
FJ708735 mRNA. Translation: ACN59329.1.
PIRiT45717.
RefSeqiNP_566892.1. NM_114625.2.
UniGeneiAt.523.

Genome annotation databases

EnsemblPlantsiAT3G47570.1; AT3G47570.1; AT3G47570.
GeneIDi823911.
KEGGiath:AT3G47570.

Cross-referencesi

Web resourcesi

PlantP kinase Classification PPC

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL132955 Genomic DNA. Translation: CAB61983.1 . Sequence problems.
CP002686 Genomic DNA. Translation: AEE78303.1 .
AY064013 mRNA. Translation: AAL36369.1 .
FJ708735 mRNA. Translation: ACN59329.1 .
PIRi T45717.
RefSeqi NP_566892.1. NM_114625.2.
UniGenei At.523.

3D structure databases

ProteinModelPortali C0LGP4.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi C0LGP4.
PRIDEi C0LGP4.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G47570.1 ; AT3G47570.1 ; AT3G47570 .
GeneIDi 823911.
KEGGi ath:AT3G47570.

Organism-specific databases

GeneFarmi 673. 56.
TAIRi AT3G47570.

Phylogenomic databases

eggNOGi COG4886.
HOGENOMi HOG000116551.
InParanoidi C0LGP4.
OMAi TAETENC.
PhylomeDBi C0LGP4.

Enzyme and pathway databases

BioCyci ARA:AT3G47570-MONOMER.

Family and domain databases

Gene3Di 2.60.120.200. 1 hit.
InterProi IPR013320. ConA-like_dom.
IPR011009. Kinase-like_dom.
IPR001611. Leu-rich_rpt.
IPR025875. Leu-rich_rpt_4.
IPR013210. LRR-contain_N2.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view ]
Pfami PF00560. LRR_1. 1 hit.
PF12799. LRR_4. 1 hit.
PF08263. LRRNT_2. 1 hit.
PF00069. Pkinase. 1 hit.
[Graphical view ]
SUPFAMi SSF56112. SSF56112. 1 hit.
PROSITEi PS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana."
    Gou X., He K., Yang H., Yuan T., Lin H., Clouse S.D., Li J.
    BMC Genomics 11:19-19(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry nameiY3475_ARATH
AccessioniPrimary (citable) accession number: C0LGP4
Secondary accession number(s): Q8VZM3, Q9SN81
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: May 5, 2009
Last modified: October 29, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3